| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3352 |
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| Symbol | |
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| ID | 5105824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3702353 |
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| End bp | 3702988 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504608 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001188836 |
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| Protein GI | 146308371 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.586652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACA AGTTGTTACA GCCTTCCGGC CCCGGCCGAC CGAAGGACCT CGCCAAACGC
CGCGCCATCC TCGACGCGGC CAAGACCCTG TTCCTGCGCC ATGGCTACGA CGGCAGCAGC
ATGGACGCCA TCGCCGCCGA GGCCGGGGTT TCCAAGCTCA CGGTGTACAG CCATTTCACC
GACAAGGAGA CGCTGTTCTC CGCGGCGGTG AAGGCCAAGT GCGAGGAACA GCTGCCGGAG
CTGCTGTTCG AGCTGCCGGC CGGGGCGCCG ATCGAGACCG TGCTGCTGAA TATCGGCCGC
GGCTTCCACG CGCTGATCAG CAGCCGCGAG TCGGTGGAGC TGCATCGGAT GATGGTCAGC
CTGGCCAGCC AGGATCCCAA GCTGGCGCTG ATGTTCTATC AGGCCGGGCC GCAGCGCGTA
CTGCAGGAGA TGGAAGCGCT GCTGTGCAGG GCAGATCAGG GCGGCCTGCT GCGGATCGAC
GACCCGCTGA TGGCCGCCGA CCAGTTCTTC AGCCTGGTCA AGGGCGGCGC GCACTTCCGC
CTGCTGATCG GTTGCTGCGC CCCGCTCGAA GGCACAGCCG CCGAACGACA CGTGCACGAG
GCAGTGGAAC TGTTTCTACG CGCCTATCGA TGCTGA
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| Protein sequence | MPDKLLQPSG PGRPKDLAKR RAILDAAKTL FLRHGYDGSS MDAIAAEAGV SKLTVYSHFT
DKETLFSAAV KAKCEEQLPE LLFELPAGAP IETVLLNIGR GFHALISSRE SVELHRMMVS
LASQDPKLAL MFYQAGPQRV LQEMEALLCR ADQGGLLRID DPLMAADQFF SLVKGGAHFR
LLIGCCAPLE GTAAERHVHE AVELFLRAYR C
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