| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3348 |
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| Symbol | glpD |
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| ID | 5105820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3695751 |
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| End bp | 3697280 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640504604 |
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| Product | glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_001188832 |
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| Protein GI | 146308367 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCACG ATCCGTTCGC CAGTCCCGTT GCGGAAGTCT ATGACCTCGC CGTCGTTGGC
GGCGGTATCA ATGGCGTGGG CATCGCCGCT GACGCGGCCG GCCGCGGCCT GTCCGTATTC
CTTTGCGAAA AGGATGACCT GGCCAGCCAC ACGTCCTCGG CCAGCAGCAA GCTGATCCAT
GGCGGCCTGC GCTATCTGGA GCATCACGAG TTCCGCCTGG TGCGCGAGGC CCTGGCCGAG
CGTGAGGTGT TGCTGGCCAA GGCGCCGCAT ATCGTCAAAC CCATGCGCTT CGTGCTGCCG
CACCGCCCGC ACCTGCGTCC GGCCTGGATG ATTCGCGCCG GCCTGTTTCT CTACGACCAC
CTCGGCAAGC GCGAACGTCT GCCCGCCTCG CGCGGCCTGC GCTTCGGCGC CGGCAGCCCG
CTCAAGGCGG AGATCAGCCG CGGCTTCGAG TACTCCGACT GCTGGGTGGA CGACGCCCGC
CTGGTGGTAC TCAACGCCAT GGCCGCCCGC GAGAAAGGCG CTCATATCCA TACCCGCACC
CGCTGCGTCA GCGCGCGACG CAGCAAGGGC CTGTGGCACA TCCACCTCGA ACGCAACGAT
GGCAGCCTGC TCTCCATCCG CGCCCGCGGG CTGGTCAACG CCGCCGGTCC CTGGGTTGCC
CGCTTCATCC GCGAAGACCT CAAACAGCAG TCGCCCTACG GCATCCGCCT GATCCAAGGC
AGCCATATCG TGGTACCGCG CCTGTACGAG GGCGAGCAGG CCTACATCCT GCAGAACGAG
GACCGACGTA TCGTCTTCGC CATTCCCTAT CTGGAACGCT TCACCCTGAT CGGCACCACC
GACCGTGAAT ACCAGGGCGA TCCGGCGCAG GTGGCCATCA GCTCCGAGGA GACCGACTAC
CTGCTCAAGG TGGTCAACGA CCATTTCAAG CAGCAGCTGA GCCGCGCCGA CGTGCTGTAC
AGCTTCTCCG GGGTCCGCCC GCTGTGCGAC GACGAGTCGG ACGAGCCTTC GGCCATTACC
CGCGACTACA CCCTGTCGTT GTCCGGTGCA CCTGGCGAAG CGCCGCTGCT CTCGGTATTC
GGCGGCAAGC TGACCACCTA CCGCAAGCTG GCCGAATCCG CCATGGCGCA GCTGCAGCCC
TACTTTGCGA ACCTGGGACC GGCCTGGACC GCCAGCGCCC CCTTGCCCGG GGGCGAGAAT
CTGGAGAGCC TGAGCGCGCT GATCGAAGCT CTCTGCGAGC GCCATGGCTG GTTACCCACC
AGCCTGGCCA GGCGCTGGGC CGTCAGCTAT GGCAGCCGCA CCTGGCGCCT GCTTGAGGGC
GTACACAACC TGACCGATCT TGGCGAACAT CTCGGCGCCG GGCTCTACAC CCGCGAAGTC
GACTACCTGC GTCGTGAGGA ATGGGTGCGC GGCAGCGCCG ACCTGCTCTG GCGACGCAGC
AAGCTGGGCC TGTTCATGAC GCCGAGCCAG CAGGCCCGCC TGCAGGATTA CCTGCGCAGT
CACGACCCGC ATTCCGCTCA CGCCGCCTGA
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| Protein sequence | MPHDPFASPV AEVYDLAVVG GGINGVGIAA DAAGRGLSVF LCEKDDLASH TSSASSKLIH
GGLRYLEHHE FRLVREALAE REVLLAKAPH IVKPMRFVLP HRPHLRPAWM IRAGLFLYDH
LGKRERLPAS RGLRFGAGSP LKAEISRGFE YSDCWVDDAR LVVLNAMAAR EKGAHIHTRT
RCVSARRSKG LWHIHLERND GSLLSIRARG LVNAAGPWVA RFIREDLKQQ SPYGIRLIQG
SHIVVPRLYE GEQAYILQNE DRRIVFAIPY LERFTLIGTT DREYQGDPAQ VAISSEETDY
LLKVVNDHFK QQLSRADVLY SFSGVRPLCD DESDEPSAIT RDYTLSLSGA PGEAPLLSVF
GGKLTTYRKL AESAMAQLQP YFANLGPAWT ASAPLPGGEN LESLSALIEA LCERHGWLPT
SLARRWAVSY GSRTWRLLEG VHNLTDLGEH LGAGLYTREV DYLRREEWVR GSADLLWRRS
KLGLFMTPSQ QARLQDYLRS HDPHSAHAA
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