| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3342 |
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| Symbol | |
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| ID | 5105814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3689694 |
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| End bp | 3690614 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504598 |
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| Product | ornithine carbamoyltransferase |
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| Protein accession | YP_001188826 |
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| Protein GI | 146308361 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0078] Ornithine carbamoyltransferase |
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| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0493063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCA GACACTTTCT CTCGATGATG GATTACACAC CGGACGAACT GGTGGGGCTG
ATCCGCCGAG GCATCGAGCT GAAGGACCTG CGCAATCGCG GTGTGCTGTT CGAACCGCTG
AAGAACCGCG TGCTGGGCAT GATCTTCGAG AAGGCCTCGA CCCGCACCCG CCTGTCGTTC
GAAGCCGGCA TGATCCAGCT CGGCGGCCAG GCCATCTTCC TCTCGCCGCG CGATACCCAG
CTGGGCCGCG GCGAGCCGAT CGGCGACGCC GCCATCGTCA TGTCGAGCAT GCTCGACGCC
GTGATGATCC GTACCTTCGC CCACAGCAAC CTCACCGAAT TCGCCGCCAA GTCCCGAGTG
CCGGTGATCA ACGGCCTGTC CGACGACCTG CACCCCTGCC AGTTGCTGGC CGACATGCAG
ACCTTCCTCG AACACCGCGG CAGCATCGCC GGCAAGACCG TGGCCTGGAT CGGCGACGGC
AACAACATGT GCAACTCCTA TATCGAAGCG GCGATGCAGT TCGACTTCCA GCTCAAGGTC
GCCTGCCCCG CAGGCTACGA GCCGGACGCA CGCTTCCTCG CCCAGGCCGG CGAGCGCGTG
CAGGTGCTGC GCGACCCGCG CGAGGCGGTG GCCGGCGCCC ACCTGGTGAG CACCGACGTC
TGGGCCTCCA TGGGCCAGGA AGACGAGGCC GCACAGCGCA TGGCGCTGTT CCGCCCCTAC
CAGGTGACCC CGCAACTGCT CGACCTCGCG GCCGAGGACG TGCTGTTCAT GCACTGCCTG
CCGGCCCACC GCGGAGAGGA AATCAGCGTC GATCTGCTCG ACGACCCACG CTCGGTAGCC
TGGGATCAGG CCGAAAACCG CCTGCACGCG CAGAAGGCGC TGCTGGAAAT GCTGGTCGAA
CCGGCGTATC ACCACGCATG A
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| Protein sequence | MSVRHFLSMM DYTPDELVGL IRRGIELKDL RNRGVLFEPL KNRVLGMIFE KASTRTRLSF
EAGMIQLGGQ AIFLSPRDTQ LGRGEPIGDA AIVMSSMLDA VMIRTFAHSN LTEFAAKSRV
PVINGLSDDL HPCQLLADMQ TFLEHRGSIA GKTVAWIGDG NNMCNSYIEA AMQFDFQLKV
ACPAGYEPDA RFLAQAGERV QVLRDPREAV AGAHLVSTDV WASMGQEDEA AQRMALFRPY
QVTPQLLDLA AEDVLFMHCL PAHRGEEISV DLLDDPRSVA WDQAENRLHA QKALLEMLVE
PAYHHA
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