| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3327 |
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| Symbol | |
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| ID | 5105800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3672071 |
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| End bp | 3672910 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640504584 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001188812 |
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| Protein GI | 146308347 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.414693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCAC TGACGGGAAG CGAACGCGCG CGGTTCAGCG CCAGCGACGA TCTGCACGGG
TTGGAGCTGT TGTCCGCACG CTTTGTCGAA CACCGTTTCG CCCCGCACGT GCACGACGGT
CATGTGATCG CCGTGCTCGA AGCCGGTGCT GAGCGCTATC GCTATCGCGG TGTCGATCAC
CTGGCGGGCG CCGGCAGCAT CGCCTTGCTC AATCCGGACG AGGTGCATAC CGGTTCCAAA
GGGGTCGAGC AAGGCTGGCA GTACCGGGTG TTCTACCCGC AGCCCGGTAC ATTCGAGGCG
CTGCTGGCCG AACTCGAGTC GCCACCGGCT GCACCGCCGA TGTTCCACGA CAGCGTGCAC
CATGATCCGC TCCTAGCGTC GCGGCTGAGT GCGCTGCACC GTCTGCTGGA GGATCCGCAC
AGCGAGGCGC TGCAACGTCA GACCCTGTGG CGCGAGGCGA TGCTCGAGCT GCTGCAGCGT
TACGCGCGCC TGCCGGCGCC GCGTGGCATC GGCCAGGAAC CGCGGGCGGT GGCGTTGGCC
AAGGAGCTGC TTGCCAGTCA GCTGAGCGAG CCGCCATCGC TGGAAGAGCT GGCGGCAGCG
GTCAATCTCT CACCCTTTCA CTTCGCCCGG GTGTTCCGCC GGGCCACCGG TCTGCCACCG
CATGCCTGGC TCAGGCAGCG CCGTCTGGAG CAGGCGCGGA CGCTGCTTAG AAGCGGCTGT
TCGGCGCTTA GCGTCGCCAT GCAGCTGGGG TTCGCCGACC AGAGCCATTT GTCGCGGCAG
TTCAAGCAAA CCTATGGCGT CAGTCCCGGC GAATACCGCA GCGCGGTGGC GCGAGGCTGA
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| Protein sequence | MQPLTGSERA RFSASDDLHG LELLSARFVE HRFAPHVHDG HVIAVLEAGA ERYRYRGVDH
LAGAGSIALL NPDEVHTGSK GVEQGWQYRV FYPQPGTFEA LLAELESPPA APPMFHDSVH
HDPLLASRLS ALHRLLEDPH SEALQRQTLW REAMLELLQR YARLPAPRGI GQEPRAVALA
KELLASQLSE PPSLEELAAA VNLSPFHFAR VFRRATGLPP HAWLRQRRLE QARTLLRSGC
SALSVAMQLG FADQSHLSRQ FKQTYGVSPG EYRSAVARG
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