Gene Pmen_3324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3324 
Symbol 
ID5105797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3668988 
End bp3669893 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content66% 
IMG OID640504581 
Producthypothetical protein 
Protein accessionYP_001188809 
Protein GI146308344 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.12957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAAA GCGACCCCAT CGGCTTCTTC TTGACGCTGG CGTTCGCCCT CGGCGCATTT 
CTGGGCGGCG GTTGGTGGTG TCTGCGACGC TGGTCGCAGG CGCGCCACCT GCTGGATACG
CCGACCTCGA AGATCCGCTC GGCAGCACAG GGCTACGTCG AGCTCTACGG CATGATCGAA
GAGCTCCCTG GCAGTTCCTT GCGCGGCCCG CTGACCAACA CGCCCTGCGT GTGGTGGCGC
TTTCGCATCG AGGAATACCG CTCCAGCGGC AAGAAGCGCT CCTGGCGGGT GATCGAAAGC
GGCAGCAGCG ATGCCTTGCT GCGCCTCTCC GATGGCACCG GGGATTGCCT GATCGACCCG
CGCGGCGCGG AGGTTCGACC GGCGATACGC GAAGTCTGGC AGGGCACTCT GCGTCACCCG
CTGGGTATGG AGAAGACCGG GCTGCTGAGC TTTCTGACCA GCAGCACGCG TTATCGCTAC
ACCGAGGAGC GCTTTCATGT CGGCCAGCCG CTCTATGCCA TCGGCGACTT TCGCACTACT
GGGGGCGGCC ATCAGGGGTT GGACCTGCCC GGTGCCCAGG GTCAGGTGAT TCGGGAGTGG
AAAAGCGACT ATGCCGGGTT GCTGCGGCGT TTCGACAGCG ACGGCAACGG TGAGCTGGAT
GATCGGGAAT GGAATCGCGT ACGCCTGGCT GCCCAGCTCG AGGCCGAGCA CCGGCACCGG
CGCAGCAGTG CGGAGCCCGC GCAGCATAAG ATGAGCAAGC CGGGGGAGTC GCGACCGTTC
ATTCTTTCCA ATGCCGGGGA GGACGAGCTG GCGCGGGGGT TCTACTGGCA GGCGGCAGGC
GCTGCGCTGT TGTGCCTGGT CGGCGCGCTG GCCACTGCCT GGCTACTCGG GATTCGGCAT
TTCTGA
 
Protein sequence
MMQSDPIGFF LTLAFALGAF LGGGWWCLRR WSQARHLLDT PTSKIRSAAQ GYVELYGMIE 
ELPGSSLRGP LTNTPCVWWR FRIEEYRSSG KKRSWRVIES GSSDALLRLS DGTGDCLIDP
RGAEVRPAIR EVWQGTLRHP LGMEKTGLLS FLTSSTRYRY TEERFHVGQP LYAIGDFRTT
GGGHQGLDLP GAQGQVIREW KSDYAGLLRR FDSDGNGELD DREWNRVRLA AQLEAEHRHR
RSSAEPAQHK MSKPGESRPF ILSNAGEDEL ARGFYWQAAG AALLCLVGAL ATAWLLGIRH
F