| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3316 |
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| Symbol | |
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| ID | 5105789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3658871 |
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| End bp | 3659596 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640504573 |
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| Product | RDD domain-containing protein |
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| Protein accession | YP_001188801 |
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| Protein GI | 146308336 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1714] Predicted membrane protein/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.742207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCAC GCTCAAGCGC CAAGCTTTCG CTTAGCCAGC CCCCCTTGGA TACGCGCTAT
CAGGTCGAAA CGCCGGAAGG CATCGACCTG CATCTGCGGC CGGCCGGTCT GGTGCCGCGT
GCCCTGGCGT TCGCCATCGA CCTGGCCATC CGCGGCCTGC TTCTGCTGGT GATGTTCATC
GTGCTTGGCC TGCTCGGACA GTTCGGCATG GGCCTGGGCA CCATCCTGCT GTTTCTGGTC
ACCTGGTGGT ACATGGTGCT GTTCGAGGTA CTCAACCAGG GGCGCTCGCC CGGCAAACAG
ATGCTCGGCC TGCGCGTGGT ACATGATGAC GGCACGCCAA TCGGCTGGGC CGCTTCACTG
ACCCGCAACC TGCTGCGCTT CGTCGACATC CTGCCGTTCG GTTACACTCT GGGCATTCTC
AGCTGCCTGA ACCATCCCGC CTTCAAGCGC CTCGGCGATA TCGCCGCCGG CACCCTGGTG
GTCTATCGCG ACGCTCCCCT GACGCGCCCG CAACTGCCGG AGGCCGAACC GCTGCCGACG
CCCTTTGCGC TGACCCTCGG CGAACAACGC GCCCTGCTCG GTTTCGCCGA ACGCGGCGCG
CAATTGTCCG CGGCGCGCCG CGCCGAACTG GCCGCCCTGC TGGCCGAGCC GCTGCAGTTG
CCTGCCGAAC AGGCGGAAGT GCGCTTGAAC GGCATCGCCC GTGGCCTGCT GGGAACGGCG
CCATGA
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| Protein sequence | MPSRSSAKLS LSQPPLDTRY QVETPEGIDL HLRPAGLVPR ALAFAIDLAI RGLLLLVMFI
VLGLLGQFGM GLGTILLFLV TWWYMVLFEV LNQGRSPGKQ MLGLRVVHDD GTPIGWAASL
TRNLLRFVDI LPFGYTLGIL SCLNHPAFKR LGDIAAGTLV VYRDAPLTRP QLPEAEPLPT
PFALTLGEQR ALLGFAERGA QLSAARRAEL AALLAEPLQL PAEQAEVRLN GIARGLLGTA
P
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