| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3302 |
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| Symbol | |
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| ID | 5105775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3645060 |
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| End bp | 3645587 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640504559 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001188787 |
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| Protein GI | 146308322 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACC TGGTTCTGGG CGTCAACGAC GCCATCTATC GCGCCTGCAT CTGGGTCGCC
GGCCTGGCGA TCGTGATCAT GGCGCTGATC ATCCCCTGGG GCGTGTTTAG CCGTTACGTG
CTCGGCCAGG GCCTGGGCTG GCCCGAGCCC ATCGCCATCC TGCTGATGGT GCTGTTCACC
TTCGTCGGCG CCGCCGCCAG CTACCGCGCC GGCGCGCACA TGGCCGTGCA GGTGCTGAGC
GATCGCCTGC CCGACGTGGC TCAGCCCTTT CTTACCCTGT TCGTACGCCT GGCCATGGCC
GCCATCGCGC TGTTCATGCT GATCTGGGGC TACAAGCTGT GCGTGGCCAC CTGGAACCAG
TACCTGAGCA CCCTGACCTG GCTGCGCGTC GGCCTGAGCT ACGCGCCGAT TCCGCTGGGC
GGGCTGATCA CCCTGCTGTT CGTCATCGAG CAACTGCTGT ACGGCGACCA GAGCAAGCGC
CGCGTCGTCG ACTACGAGAA CTGCGAAGAT TCCAAGGAGT CCGTGTAA
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| Protein sequence | MKNLVLGVND AIYRACIWVA GLAIVIMALI IPWGVFSRYV LGQGLGWPEP IAILLMVLFT
FVGAAASYRA GAHMAVQVLS DRLPDVAQPF LTLFVRLAMA AIALFMLIWG YKLCVATWNQ
YLSTLTWLRV GLSYAPIPLG GLITLLFVIE QLLYGDQSKR RVVDYENCED SKESV
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