Gene Pmen_3300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3300 
Symbol 
ID5106807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3643072 
End bp3643947 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content70% 
IMG OID640504557 
Productgluconolactonase 
Protein accessionYP_001188785 
Protein GI146308320 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.875463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCG AACTGATCCT CGATGCCCGC AATGCCACCG GCGAAAGCCC GGTGTGGCAC 
GCCGCCGAAC AGGCCCTGTA CTGGGTCGAC ATTCCCGCCG CACGCCTGCA TCGCTGGAGC
CTGCGCGATG CCAGCAGCCG GAGCTGGCAG GCCGGGGAAA TGCTCGCCTG CATCGCCCGC
CACCCGGCCG GCGGCTGGCT GGCCGGCATG CAGAGCGGCC TCTTCCATCT GCATCCGCAG
GACGATGGCA GCATGCAGGC CTCACGCCTG GCGCAGGTCG AACACGCCCG GCCGCAGATG
CGCTTCAACG ATGGACGCTG CGACCGCCAG GGGCGTTTCT GGGCCGGTAG CATGCTGCTG
GACATGGCCG CAGGCGCCCC CGTCGGCGCC TTGTATCGCT TCGACGGCCA GCTGGAGGAA
TGCCTCGCCG ATCTTGTCGT GCCCAACGGC CTGGCCTTCA GCCCCGATGG CCGCACGCTG
TACCTCTCCG ACTCGCACCC GAGCGTGCAG GCCGTGTGGG CCTTCGATTA CGACACCGAC
AGCGGCACGC CGCATAACCG CCGCTTGTTC ATCGACATGC AGCAGCACCC CGGTCGCCCG
GACGGCGCCG CCGTGGACGT CGACGGCTGC TACTGGATCT GCGGCAACGA CGCCGGACTG
ATCCACCGCT TCACCCCCGA CGGCCGCCTG GATCGTTCCC TCGCCGTGCC GGTGAAGAAG
CCGGCGATGT GCGCCTTTGG CGGGGCGAAG CTGGACACCC TGTTCGTCAC CTCGATTCGC
CCGGATGGCG ACCTCGCCGA CCAGCCGCTG GCCGGCGGCG TGTTCGCCCT GAACCCCGGC
GTGGCGGGGA TCGAGGAGCC CGCCTACCGC GCCTGA
 
Protein sequence
MQAELILDAR NATGESPVWH AAEQALYWVD IPAARLHRWS LRDASSRSWQ AGEMLACIAR 
HPAGGWLAGM QSGLFHLHPQ DDGSMQASRL AQVEHARPQM RFNDGRCDRQ GRFWAGSMLL
DMAAGAPVGA LYRFDGQLEE CLADLVVPNG LAFSPDGRTL YLSDSHPSVQ AVWAFDYDTD
SGTPHNRRLF IDMQQHPGRP DGAAVDVDGC YWICGNDAGL IHRFTPDGRL DRSLAVPVKK
PAMCAFGGAK LDTLFVTSIR PDGDLADQPL AGGVFALNPG VAGIEEPAYR A