| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3295 |
|---|
| Symbol | |
|---|
| ID | 5106802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 3637278 |
|---|
| End bp | 3638054 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640504552 |
|---|
| Product | AzlC family protein |
|---|
| Protein accession | YP_001188780 |
|---|
| Protein GI | 146308315 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
|---|
| TIGRFAM ID | [TIGR00346] 4-azaleucine resistance probable transporter AzlC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAGA ACGTTCAAGA CCTGCCTGGG GCTGCTTGGT TAAGCTGGTC GGCCCAAGGA
GGTTCCATGT CCCGTCATCA CGAATTCACC CAGGGCGCCC GCGATATGCT GCCGATGCTG
CTGGGCGCCA TTCCCTTCGG CATCATCTTC GGCAGCCTGG CCGGCGCTGC CGGGCTCAGC
CCGCTGCAGA CGATGGGGAT GTCGGCGCTG GTGTTCGCCG GTTCGGCGCA GTTCATCGCC
ATCAGCCTGC TGGCCGGCGG TGCCGGTGTG GCCGTGGTGC TGCTGACCAC CCTGGTGGTC
AATCTGCGCC ATGCCCTGTA CAGCGCCAGC CTGCAGCCCC ATGTGCGTCA CCTGCCCAAG
CGCTGGCGCG TGCCACTGGC GTTCTGGCTG ACCGACGAGG CCTATGCGGT CGTGCTGCAG
CGCTACGCGC GGGGCGATTC GGCGCCGTTG CGTCACTGGT ACTTTCTCGG CGCGGCGCTG
GCGATGTACT GCAACTGGCT GCTGTGCACC CTGGTCGGCG TGCTGTTCGG CCAGGCGGTG
CCGAACATCG GCGAGTGGGG GCTGGACTTT GCCATGCTGG CGACCTTCAT CGGCATCGTC
GTGCCCATGC TGCGCAACCA GCCGCAGGTG GCTGCTGCGC TGGTCGCCGC CGCCGTGGCG
CTGGCTTGCC ATGCGCTGCC GTACAAGCTC GGGCTGATGG CCGCGGCCGC CAGTGGCATC
GTGGTCGGCG TGTGGCTGGA GCGGCGCACG CCGGTCCTGC AGGAGGAGAT GCTCTGA
|
|---|
| Protein sequence | MRKNVQDLPG AAWLSWSAQG GSMSRHHEFT QGARDMLPML LGAIPFGIIF GSLAGAAGLS
PLQTMGMSAL VFAGSAQFIA ISLLAGGAGV AVVLLTTLVV NLRHALYSAS LQPHVRHLPK
RWRVPLAFWL TDEAYAVVLQ RYARGDSAPL RHWYFLGAAL AMYCNWLLCT LVGVLFGQAV
PNIGEWGLDF AMLATFIGIV VPMLRNQPQV AAALVAAAVA LACHALPYKL GLMAAAASGI
VVGVWLERRT PVLQEEML
|
|---|
| |