Gene Pmen_3286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3286 
Symbol 
ID5106793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3631576 
End bp3632541 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content67% 
IMG OID640504543 
ProductMerR family transcriptional regulator 
Protein accessionYP_001188771 
Protein GI146308306 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAG CCATGTCCGA ACCCGCCGGT GTTACGTCAC TTGCGTCCAG CGCCCTGAAG 
CAGGAGGAGC TGTTCCCCAT TCGCGAGGTC TCTCGTCTGA CGGGCGTGAA CCCGGTCACC
CTGCGCGCCT GGGAACGGCG TTACGGGCTG ATCCAGCCGA CCCGCACCGA CAGCGGGCAT
CGGCTCTATT CGCAGGCCGA CATCGATGCC GTGCGCAGCA TCCTGGCCTG GATAGAGCGC
GGTGTTGCGG TGAGCAAGGT GGGCTCGATC CTGGCCAAGA GTGCCAGCAG TCGCAGCGCC
GTCACCCCTG CCTACAACGA GGTCAGCAGC GATGACTGGA GCCAGTGGCA GGCGCAGATC
CGCCGCGCGC TGGACAGTTT CGACGAGGCG CGTCTGGAGC GGCTGTATGG CCAGATATTC
TCCTGCTACC CGCTGCCGGT GGTGTTTCAG GACATCCTGA TGCCGATCTG GCAGGAGCTG
CTGCTGCGCC AGGACGAGGT TGGCCAGCGC AGCGAATGGG TACTGCTCGA CGGTTTTCTG
CGCGGCCGCT GCTGGCAGCG CCTGCAGCTG GGGCGGGGCG AGTCGGGTGA GCGGGTGCTG
CTGGCGGCCC AGCCCGGACA CTGTCGCGAG CTGGAACTGC TGGTCGCGGC GCTGATGCTG
AGCACTCAGG ACATCGCAGT GAGCGTGATG GGGCCCGGGG TGCCGCTGAG CGATCTGCCG
CTGGTGTGCG AGCGCATGCA GCCGCAGGCG CTGGTGCTGT TCAGCAACCA GCCGCCGGCC
GAGGACTGCC CGCGTCAGCT GTCGCGTCTG GCGCTCGCGC TAGAGTGTCC GTTGCTATTG
GCGGGGGATA GCGCCGACCT GGCCGAGGAA AGCCTGGCCG GCTCGCCCAT CGCATGCCTG
GGCAATGAGG GGCGGCTTAT GCAGCGGCGC CTGCAGCAGT TCCTCGCCGG TCATCTCGAT
ACCTGA
 
Protein sequence
MPEAMSEPAG VTSLASSALK QEELFPIREV SRLTGVNPVT LRAWERRYGL IQPTRTDSGH 
RLYSQADIDA VRSILAWIER GVAVSKVGSI LAKSASSRSA VTPAYNEVSS DDWSQWQAQI
RRALDSFDEA RLERLYGQIF SCYPLPVVFQ DILMPIWQEL LLRQDEVGQR SEWVLLDGFL
RGRCWQRLQL GRGESGERVL LAAQPGHCRE LELLVAALML STQDIAVSVM GPGVPLSDLP
LVCERMQPQA LVLFSNQPPA EDCPRQLSRL ALALECPLLL AGDSADLAEE SLAGSPIACL
GNEGRLMQRR LQQFLAGHLD T