| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3268 |
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| Symbol | |
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| ID | 5106775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3618327 |
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| End bp | 3619661 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504525 |
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| Product | Beta-xylosidase-like protein |
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| Protein accession | YP_001188753 |
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| Protein GI | 146308288 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3664] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.309548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGCA TCCCCTCCTT CCGCCTGCGT CGCGCCCTGG GCGCGGGTCT GTTGTCTCTG
TCACTGGGCC TCGGTCTGAG CGCCCAGGCC GCCCCCTCGA ACTCGATGAA GGCGCCGCGC
CCGGTGGTCT GGTCGGACTT CCTGGGCCTC AACGTACAAC TGCAGTGGTT TCCCGAGCAG
ACCTATCGAC AGCAGATCGC CAAGTTGAAG GCGCTCGATC TGCGGTGGAT TCGCCTGGGC
CTGCACTGGG AGCGCCTGGA GCCCGCCCCG GGACAATGGC AATGGACGGA CCTTGATCGC
CTGATGCAGG TGATCGAGCA GGAACAACTC AAGCCCCTGG TGTACCTGGT CGGTTCGGCC
CCCTTCGCCA CGTCCGCACC GGCCGGCGTG AGCAACCCCG ACCAGTACCC GCCAACCAAC
CCGCAACTGT TCGCCAACAG CTTCGCCACA CTGGCCAGCC GCTATCCCCA TGTCGGTGCC
TGGCAGGTCT GGAACGAGCA GAACATTCCA CCCTTCTGGC AGCCGGCCGA AGATCCGGTC
CAGTACCGAC AGTTGCTGGA AAGCAGCCTC GGCGCACTGA CCGCCGCCCG CCCGGACGCC
ACCCAGGTGA TAGGCGGCCA CGCCTACTAC AGCCAGATGC CCGTGCGTGG CGGCCTGATG
CTGCAGGCCA TGACCCAGCT GGGCAGCGTA AGGCCGGATC GAGTGACGGC CTATCACCCT
TACAGTCACG AGCCGGAGGG CGACGTGCCC GGCGTCGGCG ATTTCATTGC CCACGCCAAT
ACGGTCAACC AGTATCTGCG CCATTCCGGT AGCGGGCCAA TCTGGGCCAC GGAGTTCGGC
TGGTCGAGCT ATGCCGGGCC GGTGGAACTG CAACCGATCA TCGGCGAACA GGGCCAGGCC
GACTACATGC TGCGACGCCT GGCGCTGATG AGCGCGATGG ATTTCGACCG CATCTTTCTC
TTCACCCTCA GCGATCTGGA TGCGCGCGCC ACGCCACGCG ACCAGTTCTA TGGTCTCCTG
CGCCTGAACG GCAGCGAGAA GCCCGCCTAC CAGGCACTCA AGCGTTTCCT GCAGATCAGC
GGCCCCAGCC TCACGCCACT GGACCCGCCA GCCTTCGCCA GTGCGCCGGC CGGCATGTTC
AGCATCGCCT GGCAGCGCGC CGATGGGCGC TGGCTGTGGA TGTTCTGGGC GCAGGAGAAC
GGTACCGTGC GCCTGCAACG CAGTGGCAGC GGCACCCTCT ACAACCCGCT GCGTGGCACC
AGCCAGAGCG TGCGCTCGAG CGGCGGCAGC ATCAACGTCA CGGTCGGCCG CGAGCTGCAA
ATGCTGATCT TATGA
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| Protein sequence | MFSIPSFRLR RALGAGLLSL SLGLGLSAQA APSNSMKAPR PVVWSDFLGL NVQLQWFPEQ
TYRQQIAKLK ALDLRWIRLG LHWERLEPAP GQWQWTDLDR LMQVIEQEQL KPLVYLVGSA
PFATSAPAGV SNPDQYPPTN PQLFANSFAT LASRYPHVGA WQVWNEQNIP PFWQPAEDPV
QYRQLLESSL GALTAARPDA TQVIGGHAYY SQMPVRGGLM LQAMTQLGSV RPDRVTAYHP
YSHEPEGDVP GVGDFIAHAN TVNQYLRHSG SGPIWATEFG WSSYAGPVEL QPIIGEQGQA
DYMLRRLALM SAMDFDRIFL FTLSDLDARA TPRDQFYGLL RLNGSEKPAY QALKRFLQIS
GPSLTPLDPP AFASAPAGMF SIAWQRADGR WLWMFWAQEN GTVRLQRSGS GTLYNPLRGT
SQSVRSSGGS INVTVGRELQ MLIL
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