Gene Pmen_3267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3267 
Symbol 
ID5106774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3617362 
End bp3618036 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID640504524 
Producthypothetical protein 
Protein accessionYP_001188752 
Protein GI146308287 
COG category[S] Function unknown 
COG ID[COG3342] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.881887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTTT CCATCATCGC CCGCTGTCCA CGCAGCGGTC AGTTCGGTGT CGCCGCAGCC 
ACCGCCATGC CTGCCGTGGG CAAGCTGCTC AGCCACGCGG CGGCCGGCGT CGGCGCGGTG
GCGACCCAGG CCCAGGTCAA CCCCTATCTC GGCCTGGATG GCCTGGCGCT GCTGCGCCAG
GGGCTCTCCG CGAAGGCGGC GCTGGAGCGA CTCAAAGGCA CCGATCCCTG TATGGAATTG
CGCCAGTGCG CATTGATCGA CACCCAGGGC GACAGCGTCT GCTGGACCGG GGAAAAATGC
ATTCCCTGGG CTGGCTCGCT AACCGGCGAG CAGTTCTCCG TACAGGGTAA CCGCCTGGTT
GGCCCGCAGG TGCTGGAAGC GGTGGCCGAG GCCTTTCGCC GCGGCGACGA GCGCCCGCTG
ATCGAGCGCC TGATCGAGGC ATTGGCAGCC GGCGACCGGT GCGGCGGCGA CCGCCATGGT
GAATCCTCGG CGGTGATCTA TGTGGTCGAC CGGGAGCAGT ACCCGCTATG GGACATCCGC
GTCGACCACC ACCTCGACCC AGTGGCCGAG CTGCGCCGTC TGCACGATGT ATTCGCCCGC
GAAGTGCTGC CTGAAATTCT CGCCATGCCG ACGCGCGACA ACCCGGCAGG CAAGGCAGCG
GAAGACGCCG TCTAA
 
Protein sequence
MTFSIIARCP RSGQFGVAAA TAMPAVGKLL SHAAAGVGAV ATQAQVNPYL GLDGLALLRQ 
GLSAKAALER LKGTDPCMEL RQCALIDTQG DSVCWTGEKC IPWAGSLTGE QFSVQGNRLV
GPQVLEAVAE AFRRGDERPL IERLIEALAA GDRCGGDRHG ESSAVIYVVD REQYPLWDIR
VDHHLDPVAE LRRLHDVFAR EVLPEILAMP TRDNPAGKAA EDAV