Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3267 |
Symbol | |
ID | 5106774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3617362 |
End bp | 3618036 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640504524 |
Product | hypothetical protein |
Protein accession | YP_001188752 |
Protein GI | 146308287 |
COG category | [S] Function unknown |
COG ID | [COG3342] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.881887 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTTT CCATCATCGC CCGCTGTCCA CGCAGCGGTC AGTTCGGTGT CGCCGCAGCC ACCGCCATGC CTGCCGTGGG CAAGCTGCTC AGCCACGCGG CGGCCGGCGT CGGCGCGGTG GCGACCCAGG CCCAGGTCAA CCCCTATCTC GGCCTGGATG GCCTGGCGCT GCTGCGCCAG GGGCTCTCCG CGAAGGCGGC GCTGGAGCGA CTCAAAGGCA CCGATCCCTG TATGGAATTG CGCCAGTGCG CATTGATCGA CACCCAGGGC GACAGCGTCT GCTGGACCGG GGAAAAATGC ATTCCCTGGG CTGGCTCGCT AACCGGCGAG CAGTTCTCCG TACAGGGTAA CCGCCTGGTT GGCCCGCAGG TGCTGGAAGC GGTGGCCGAG GCCTTTCGCC GCGGCGACGA GCGCCCGCTG ATCGAGCGCC TGATCGAGGC ATTGGCAGCC GGCGACCGGT GCGGCGGCGA CCGCCATGGT GAATCCTCGG CGGTGATCTA TGTGGTCGAC CGGGAGCAGT ACCCGCTATG GGACATCCGC GTCGACCACC ACCTCGACCC AGTGGCCGAG CTGCGCCGTC TGCACGATGT ATTCGCCCGC GAAGTGCTGC CTGAAATTCT CGCCATGCCG ACGCGCGACA ACCCGGCAGG CAAGGCAGCG GAAGACGCCG TCTAA
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Protein sequence | MTFSIIARCP RSGQFGVAAA TAMPAVGKLL SHAAAGVGAV ATQAQVNPYL GLDGLALLRQ GLSAKAALER LKGTDPCMEL RQCALIDTQG DSVCWTGEKC IPWAGSLTGE QFSVQGNRLV GPQVLEAVAE AFRRGDERPL IERLIEALAA GDRCGGDRHG ESSAVIYVVD REQYPLWDIR VDHHLDPVAE LRRLHDVFAR EVLPEILAMP TRDNPAGKAA EDAV
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