| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3264 |
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| Symbol | |
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| ID | 5106771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3612886 |
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| End bp | 3614013 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504521 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001188749 |
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| Protein GI | 146308284 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCAA CCAGCCGCCG AGGCACTCAA CGCAGCCTGC AGAGCCTTCT GCTCAAACGC
TTCGCCATGG CATTCGCTAC CTACGCGATG ATGGCGCTCG TCTGCTGGTT CGCCGTACTC
AACGACCTGT TCCTCGGTCC CGTCAGCGCC GCTGTCTGGC TCACGCTGGG CGTGTTCGGC
AGCCAGCTGG TGTTTCTCTG GATCTTCCTC AGCGGGCGCA ACCTGCGCTT CGACGATCCC
AGCCTGACCG AGGCCCAGGT ACTGGTCGCG CTGGCCTGGC AGCCACTGGT GATGGCCTTC
TTCGACACCG CCCGCGGCAG CATGATGGTG TTCTACGTGC TGATCCTGCT GTTCGGCGTG
TTCCAGCTGC CGCCCAAGGT GTTCGCACGT TGCGCCGCCT TTGCCTTCTT CGGCTTCACC
GCGATGGTGC TGGTGGAGGC CTATCGCATG CAGTTGGTGG ACCCGAGCAT GGCCTGGCTG
CAGGTCTGGG TGCTGTTCGT CCTGCTGGTC TGGCTGTGCC TGTTCTCCAG CTACGTGCAG
GCCATGCGCA AGCGCATGCG CCAGCGCCGT TTCGCCCTGC AGGCACACCA GGACACCCTG
CGCGGGATGA TGCGCCAGCT CGAGGATCTG GTGGCCACCG ACGAGCTGAC CGGGCTGTTC
AACCGCCGCC ATTTCCTGCG TCTGGCCTGC CGCGAGCTGG AGCATCTCGG GCACGGGCGC
CAGCACGGTC TGGCCTTGAT CGACCTGGAC CATTTCAAGC GAATCAACGA TGCTCATGGC
CATGCCGCTG GCGATCGGGT GCTGCAGACC TTCGCCGCGG TAGCCCGTGC CTGTCTGCGT
GACGGCGACA TCATTGCCCG CTACGGCGGT GAGGAATTCG TGCTGCTGCT GCCCAATACC
GATGCCGATC AGTTCACCAC CTGCTGCGAG CGGCTGCGCG AGGCGTTCGC CCGGGCCGAG
CCGGTGGGGG TGAAAATCGA CAACCTCAGC CTGTCCGCCG GCATGACGCT GCTCACCGCC
GGCGATCAGC TGGACGAAGC GCTGCAACGT GCCGACCAGG CGCTGTACCA GGCCAAGCGC
GGCGGTCGCA ACCGTTGCGA TGCCAGTTGG GAGCGCGCCG GTGCCTGA
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| Protein sequence | MSSTSRRGTQ RSLQSLLLKR FAMAFATYAM MALVCWFAVL NDLFLGPVSA AVWLTLGVFG
SQLVFLWIFL SGRNLRFDDP SLTEAQVLVA LAWQPLVMAF FDTARGSMMV FYVLILLFGV
FQLPPKVFAR CAAFAFFGFT AMVLVEAYRM QLVDPSMAWL QVWVLFVLLV WLCLFSSYVQ
AMRKRMRQRR FALQAHQDTL RGMMRQLEDL VATDELTGLF NRRHFLRLAC RELEHLGHGR
QHGLALIDLD HFKRINDAHG HAAGDRVLQT FAAVARACLR DGDIIARYGG EEFVLLLPNT
DADQFTTCCE RLREAFARAE PVGVKIDNLS LSAGMTLLTA GDQLDEALQR ADQALYQAKR
GGRNRCDASW ERAGA
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