| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3254 |
|---|
| Symbol | potE |
|---|
| ID | 5106761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 3603871 |
|---|
| End bp | 3605199 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640504511 |
|---|
| Product | putrescine transporter |
|---|
| Protein accession | YP_001188739 |
|---|
| Protein GI | 146308274 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGA CAGGCAGGAA GATGGGCCTT GTGGGCCTGA CCACCCTGGT AGCGGTTAAC
ATGATGGGCT CGGGCATCAT CATGTTGCCT TCGAGCATGG CTCAGCTGGG CGCGGTTTCG
TTGCTGTCGT GGCTAGTCAC TGCGATCGGC TCGATGGCCA TTGCCTACGG CTTCGCACAA
TGCGGCATCT ATTGTCCGCG ACCCGGCGGC ATGTCTGCCT ACAGCGAGGA GGCCCACGGC
AAGTCCGCGT TCTTTCTGTG CTCCTATCTG TACTTTCTTT CCTTGGTGAT CGGCAACGTG
GCCATCGGCA TTTCCGCCGT CGGCTACCTG ACGCCCTTCT TTCCCTGGCT GGGCAGCGGA
GCCGTGGCCG TGGTAGCCGG CACCATCGCT CTCATCTGGC TGACCATACT GGCCAATCTC
GGCGGCCCCA GCCTCACCGG GCGCCTCGGT GCAGTGACCG TATGGGGGGT CATCATTCCC
GTGGCGGGCC TGGGCCTGAT CGGTTGGTTC TGGTTCGAGC CAAGCCTGTT CAGAGAAGCC
TGGAACCCCA ACGGTCTGCG CACCAGCGAT GCCATCGCGC AAAGCATTCC GCTCACTCTG
TGGGCGTTTC TCGGCATGGA GTCAGCGGCG CAGAACTCCG ATGCAGTGGA AGATCCCAAG
CGCAACGTGC CGCTCGCCTG CCTGTTCGGC ACGCTCGGGG CCGCCGTGGT CTATGTGCTG
TCAACCAGCG TGATTCAGGG CATCGTTCCC AACCCGGAAC TGGCCAACTC CAGCGCGCCC
TTCGCTCTGG TCTATGCACA GATGTTCAAC GACAGCGTGG GCAACATCAT CATGGCCCTG
GCGGTGATGG CCTGTCTGGG CTCACTGCTG GGCTGGCAGT TCACCCTGGC ACAGACGGCC
AAGGTCACCG CGGAACAAGG CATGTTCCCT AAGCTGTTCA CCCGGGTCAG CGCCCGCAAC
GCGCCCCTAC TCGGCCTGCT TTTCTGCGGC GTCCTGCAGA CCCTGATCGC GTTGTCGACC
ATCTCGCCCA ATGCGAGCGC ACAGTTCAAC AAGCTCGTCG GCCTGGCTGC AGTGACCAAC
ATCATCCCCT ACATCACCTC CCTGACCGGC CTGTTGGTGA TCATGTACAA GGCCCAGGTC
GAGCCGCGCA TCTTCCGCCG CAACGGAGCG ATTCTGCTGG TGGCCATGCT GTACTGCTTT
TATGCCCTGT ATGCCTCGGG CCTGGAGGCG GTGTTCGGTG CGGCACTGGT GATGGTGGTC
GGGTATCTGC TGTTCGGCAG TATCGCCAAA CGCTTCGTCG GCACCCTGGA CAACCTTGGC
CGGCCATAG
|
|---|
| Protein sequence | MAETGRKMGL VGLTTLVAVN MMGSGIIMLP SSMAQLGAVS LLSWLVTAIG SMAIAYGFAQ
CGIYCPRPGG MSAYSEEAHG KSAFFLCSYL YFLSLVIGNV AIGISAVGYL TPFFPWLGSG
AVAVVAGTIA LIWLTILANL GGPSLTGRLG AVTVWGVIIP VAGLGLIGWF WFEPSLFREA
WNPNGLRTSD AIAQSIPLTL WAFLGMESAA QNSDAVEDPK RNVPLACLFG TLGAAVVYVL
STSVIQGIVP NPELANSSAP FALVYAQMFN DSVGNIIMAL AVMACLGSLL GWQFTLAQTA
KVTAEQGMFP KLFTRVSARN APLLGLLFCG VLQTLIALST ISPNASAQFN KLVGLAAVTN
IIPYITSLTG LLVIMYKAQV EPRIFRRNGA ILLVAMLYCF YALYASGLEA VFGAALVMVV
GYLLFGSIAK RFVGTLDNLG RP
|
|---|
| |