Gene Pmen_3250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3250 
Symbol 
ID5106757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3601322 
End bp3601993 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content62% 
IMG OID640504507 
Producthypothetical protein 
Protein accessionYP_001188735 
Protein GI146308270 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAGC TCCTTGGTAT GTCGTTATTG GCGGCACTCA TCGGGACTGC CGCATGTTCC 
AACACGCTGG TGGCGCCCGA GCAGTACTCG GGTTTCCTGC AAGATTACAG TCGTCTCAGC
GAACAGCAGT CACCCTCCGG GGCAAAGGTG GCACGCTGGG TCGATCCGGA TCTGCAGGTC
GGTCGTTACA ACCAGTTGTT GCTCGAGCCC AGTCAGTTCT ACCCAACGCC CCAACCAAGT
CCACGACTGT CGCAGGATAC GCTGCAAGAC ATCACCCAGT ATTTCGATGC GGCTCTGCGC
CGCGAGCTGG GCAAGGTCAT GCCGCTTACC GACACGCCTT CCGCCGGCAC CCTGGTGCTG
CGCCCGGCCA TCACAGCCGT CTCGGCGTCC ACTGAAGGCC TGCAACCCTA CGAAGTCATT
CCCATTGCCC TGATGGTGGC TGCCGCGAGC ACGGCGGCCG GGACACGCGA CCAACAGGTG
GAGATCGCTA CCGAGGCGGC GGTGATCGAC GCGCAGAACA GCCGCGTCGT CGCACAGGTC
GTGCGCAAGG GTACGGGCCT TAATCTGGAG AACGATCACC AGGTACTCAG CGTCGAGAAC
GTCAAGCCAG TGATTGATGG CTGGGCCAGC GATATGCGCC AGTCCATCGA GCAGCTCAGG
GCGAAACGTT AG
 
Protein sequence
MRKLLGMSLL AALIGTAACS NTLVAPEQYS GFLQDYSRLS EQQSPSGAKV ARWVDPDLQV 
GRYNQLLLEP SQFYPTPQPS PRLSQDTLQD ITQYFDAALR RELGKVMPLT DTPSAGTLVL
RPAITAVSAS TEGLQPYEVI PIALMVAAAS TAAGTRDQQV EIATEAAVID AQNSRVVAQV
VRKGTGLNLE NDHQVLSVEN VKPVIDGWAS DMRQSIEQLR AKR