| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3246 |
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| Symbol | |
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| ID | 5106753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3597053 |
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| End bp | 3598057 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640504503 |
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| Product | transketolase, central region |
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| Protein accession | YP_001188731 |
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| Protein GI | 146308266 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGA AGCCAGCCCC GAGCGAAAAG AAGGTCAGCC TGCTGGAGGC GGTCAACCTG
GCCCTGCACC GGGCCATGGC CGAGGATGAG AACGTCGTGG TGCTGGGCGA GGACATCGGC
GTCAACGGCG GGGTGTTCCG CGCCACTGCC GGGTTGCGCG ATGCATTCGG CTTCAAGCGG
GTGATCGACA CCCCGCTGGC CGAAACCATG ATCGCCGGGC TCAGCGTCGG CATGGCGGCG
CAGGGGCTCA AGCCGGTGAT GGAGATCCAG TTCATGGGCT TCATCTACCC GGCCCTGGAT
CACCTGATCT GCCACGCCAG CCGCCTGCGC AATCGCACCC GCGGCCGCCT CAGCTGCCCC
ATGGTGCTGC GCACGCCGAT GGGCGCCGGG ATTCGCGCCC CCGAGCATCA CAGCGAGAGC
ACCGAGGCGC TGCTGGCGCA TATCCCCGGC CTGCGCGTGG TCATCCCCTC GTCGCCGGCG
CGCGCCTACG GCCTGCTGCT GGCGGCCATC GACGACCCGG ACCCGGTGGT GTTTCTCGAA
CCCACCCGGC TATACCGCAT GAACCCGCAG CCGCTGGCCG ACGACGGCAG GCGCCTGCCA
CTGGACAGCT GCTTCACCCT GCGCGAGGGC CGCGACCTGA CCCTGGTCAG CTGGGGCGCG
AGCATCCACG AGACGCTGCA GGCCGCCGAC CGGCTGGCCG AACGCGGCAT CGCCGCCGAG
GTGATCGACG TCGCCTGCGT CAAGCCGCTG GACGTCGACA CCCTGGAGGC CTCGGTGCGC
AAGACCGGGC GCTGCGTGAT CGTCCACGAG GCGCCTAAGA GCTGCGCGGT CGGCGCGGAA
ATCGCCGCCA GCCTGTACGA GCGTGCGCTG CTCGACCTGC AGGCGCCGAT CCAGCGGGTC
ACCGCGCCGG ACATTCCGCC GCCGCTGTAT CGCCTGGAGC AGCTGTACAT CCCCGGTGTC
GAGGACATCC TCGCCGCCTG CGAGACGGTG CTGGAGTACG CCTGA
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| Protein sequence | MSEKPAPSEK KVSLLEAVNL ALHRAMAEDE NVVVLGEDIG VNGGVFRATA GLRDAFGFKR
VIDTPLAETM IAGLSVGMAA QGLKPVMEIQ FMGFIYPALD HLICHASRLR NRTRGRLSCP
MVLRTPMGAG IRAPEHHSES TEALLAHIPG LRVVIPSSPA RAYGLLLAAI DDPDPVVFLE
PTRLYRMNPQ PLADDGRRLP LDSCFTLREG RDLTLVSWGA SIHETLQAAD RLAERGIAAE
VIDVACVKPL DVDTLEASVR KTGRCVIVHE APKSCAVGAE IAASLYERAL LDLQAPIQRV
TAPDIPPPLY RLEQLYIPGV EDILAACETV LEYA
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