Gene Pmen_3232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3232 
Symbol 
ID5106739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3578088 
End bp3578993 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content67% 
IMG OID640504489 
Producthypothetical protein 
Protein accessionYP_001188717 
Protein GI146308252 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.274981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGT CGCTATACCT GCTTACCGTG CTGATCTGGG GCACCACCTG GATCGCCATC 
AAATTGCAGA TGGGCGAGGT GGCCGTGGCC GCCTCCATCG CCTATCGCTT CGCATTGGCC
TCGGCGGTGC TGTTTGCCAT GCTCTGGTTC AGCGGGCGCC TGCAGCCGCT GGACCGTCGC
GGCCAGGGCA TTTGCCTGGT GCAGGGCCTG TGTCTGTTCT GCCTCAACTT CCTGTGCTTC
TACACCGCCA GCCAGTGGAT CCCCAGCGGC CTGATCGCGG TGATCTTCTC CACCGCCACC
TTGTGGAACG CGATCAATGC GCGGCTGTTC TTCAAGCAGC GCATCGCCGC CAACGTGCTG
CTCGGCGGCG GCCTGGGGCT GGCCGGCCTG GGGCTGCTGT TCTGGCCGGA ACTGGCCGGG
CACGAGGCCA GCCGCGAGAG CCTGCTGGGC ATCGGCCTGG CGCTGTGCGG CACGCTGTGC
TTCTCCGCCG GCAACATGCT GTCCAGCCTG CAGCAGAAGG CCGGGCTCAA GCCGCTGACC
ACCAACGCCT GGGGCATGCT CTATGGCGCG CTGATGCTGG TGGGCATCTG CCTGGTCAGC
GGCACGCCGT TCGCCTTCGA GTGGAACGCG CGCTACGTCG GCTCGCTGCT GTACCTGGCG
ATTCCCGGTT CGGTCATAGG GTTTACCGCC TACCTGACCC TGGTCGGGCG CATGGGGCCG
GAGCGCGCCG CCTACTGCAC GGTGCTGTTC CCGGTGGTGG CGCTGAACAT CTCGGTGTTC
GCCGAGGGCT ATCAGTGGAC GGCTCCCGCG CTGCTCGGTC TGGCCCTGGT GATGGCGGGC
AATGTGCTGG TGTTTCGCAA GCCGCGGGTC TTGCCGGTGC CCGCTGCGCT GGTCACTCCG
AAGTGA
 
Protein sequence
MNLSLYLLTV LIWGTTWIAI KLQMGEVAVA ASIAYRFALA SAVLFAMLWF SGRLQPLDRR 
GQGICLVQGL CLFCLNFLCF YTASQWIPSG LIAVIFSTAT LWNAINARLF FKQRIAANVL
LGGGLGLAGL GLLFWPELAG HEASRESLLG IGLALCGTLC FSAGNMLSSL QQKAGLKPLT
TNAWGMLYGA LMLVGICLVS GTPFAFEWNA RYVGSLLYLA IPGSVIGFTA YLTLVGRMGP
ERAAYCTVLF PVVALNISVF AEGYQWTAPA LLGLALVMAG NVLVFRKPRV LPVPAALVTP
K