| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3231 |
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| Symbol | |
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| ID | 5106738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3575893 |
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| End bp | 3577956 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504488 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001188716 |
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| Protein GI | 146308251 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.854124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGTCG TCAGATGCAG TTACCTGGCG CTGGGCGTAG CCCTAGCCTT TACCCATCTA
CCCGCCCTGG CCGAGCGTGT AGAGCTGGAA GGCACCGAGG TGGTGGGCGA CTGGCTGGGT
GAGGCGAGCG AGCAGGACGT ACTCAACCAT GCCGGTGCGC GCAGCGTGCT GCGCCGCCAG
CAGATTCAGG AAAGCGGCGC GAGCAGCGTG CGCGAAGTCT TGCGTCGGGT ACCCGGTCTG
CAGGTGCAGG ACAGCAACGG CACCGGCGGC AGTGACATCT CCCTCAATGT CGGCACGCGC
GGTCTGACTT CGCGACTGTC GCCGCGCGCC ACCATCCTGC AGGACGGCGT GCCCCTGGCG
GTGGCGCCCT ATGGTCAGCC GCAGCTGTCG CTGGCCCCCA CCAGCCTGGG CAACATCGAG
TCCATCGACG TGGTGCGTGG CGGTGGTGCG GTGCGTTATG GCCCGCAGAA CGTCGGCGGC
ATCATCAACT TCGTCACCCG CGGGATTCCC GAGGAGATGG CGCGCGAGGT CAGCTTCCAG
AGCGAATCGG CGCCGGCGCA GGGCGGTTTC CTCAACCGCA GCAGTGCCTT CCTCGGCGGC
ACCGCCGACA ACGGTCTGGG CATGGCCCTG CTGTATTCGG GCGTGCGCGG CGATACCTTC
CGCGAGCAGA GCGGCACGCG CATCGACGAC GTGATGCTCA AGTACCGTTA TGCCCTGAGC
GAGATCGACG AGCTGTCCGG CAGCCTGCAG TACTACCGCG CCGACGCCGA CATGCCGGGT
GGCCTCACCG CCGCCGAATT CGACCAGGAC CCTTACGCCA GCAACCGTCC GTATGACAAC
TTCGAAGGGG ATCGCAAGCA GGCGGTGCTC AAGTACAAGC GCAGCCCGGA TGCGTTGAGC
AGTTTCGAGA TCACCAGCTT CTACAACACC AGCTACCGGG GCGCGGTGCT GGCCAACAAT
GGCGCCGATC GCCTGACCTG GCTGCGTGAG TTTCCCCGTC ATTACGAGGT GTTCGGCATC
GAGCCGCGCT ATTCGCAGGT GTTGTTCGTC GGTGACAGCA GCCACGAAGT GGGCATCGGC
TATCGCTACA CCGAAGAGGA CTCCTCCGAG AAGCGTTACG ACCGCGTCAA CTTCGGCACC
GGCGGCAATC CTTACAGCGT ACCGCGCCGC CTGGCCACTT CGACCAGCGC CAGTACCGAA
GCGCACGCCC TGTACATCGA CGATCGCATC GACATCGGCC GCTGGACCCT GACCCCCGGC
GTGCGTTACG AACAGGTGCG GGTGACCTCG CGCAACCGCC TCAGCGGCGT CGATCAGGAG
CAGCGCTACA GCGAGCCGCT GCCATCGCTG AACCTGATGT ACCACCTGTC CGATGCCTGG
AAGCTGTTCG CCAACGCCAA CACCTCGTTC GGCAGCATCC AGTACTTCCA GCTGTCGCAG
GACAGCGACC TGCAGGGCGA GAAGGCCTAC ACCTATGAGC TGGGCACGCG CTACGACGAT
GGCCTGTTGA ATGGTGAACT GACGCTGTTC CGGATCGACT TCGACGATCA GCTGGAACTG
GTCGATGCGG TCTGGCGCAA TGCCGGCGAG ACCCGCCACC GCGGCGTCGA GCTGGCCGGT
GGTGTCGACT TCGCCGCGCT GGATCCGCGT CTGGCCGGGC TTTCCGCCTA CGCCTCGCTG
GTGCTGACCA AGGCCACGCG GGAGGAAGAC GGGCCCAACC AGGGCAACGA CGTGCCGTTC
TACTCGCGCC AGGTCGCCAC GCTGGGCTTG CGTTATGCCA GCGGCCCCTG GGTGTGGAAC
CTGGACGGCT ACGCGCAGAC CCGCCAGTTC GCCGACTCGG CCAACACCCG CGAGGAAAGT
GCCGACGGCG CGCTTGGCGA GATCCCGGGC TATGCCAGCT GGAACGCTCG CGGCCAGTAC
GATTTCGGCA ACGGCCTGAC GCTGGCCGCC GGGGTCAAGA ACCTGCTCGA TCGCCAGTAC
TACACGCGTT CCACCGACAC CAACCGCGGC AAGTACCTGG GCCAACCGCG CACCTTGTAC
GTGCAGACCA GCCTGAGCTT CTGA
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| Protein sequence | MFVVRCSYLA LGVALAFTHL PALAERVELE GTEVVGDWLG EASEQDVLNH AGARSVLRRQ
QIQESGASSV REVLRRVPGL QVQDSNGTGG SDISLNVGTR GLTSRLSPRA TILQDGVPLA
VAPYGQPQLS LAPTSLGNIE SIDVVRGGGA VRYGPQNVGG IINFVTRGIP EEMAREVSFQ
SESAPAQGGF LNRSSAFLGG TADNGLGMAL LYSGVRGDTF REQSGTRIDD VMLKYRYALS
EIDELSGSLQ YYRADADMPG GLTAAEFDQD PYASNRPYDN FEGDRKQAVL KYKRSPDALS
SFEITSFYNT SYRGAVLANN GADRLTWLRE FPRHYEVFGI EPRYSQVLFV GDSSHEVGIG
YRYTEEDSSE KRYDRVNFGT GGNPYSVPRR LATSTSASTE AHALYIDDRI DIGRWTLTPG
VRYEQVRVTS RNRLSGVDQE QRYSEPLPSL NLMYHLSDAW KLFANANTSF GSIQYFQLSQ
DSDLQGEKAY TYELGTRYDD GLLNGELTLF RIDFDDQLEL VDAVWRNAGE TRHRGVELAG
GVDFAALDPR LAGLSAYASL VLTKATREED GPNQGNDVPF YSRQVATLGL RYASGPWVWN
LDGYAQTRQF ADSANTREES ADGALGEIPG YASWNARGQY DFGNGLTLAA GVKNLLDRQY
YTRSTDTNRG KYLGQPRTLY VQTSLSF
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