Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3226 |
Symbol | |
ID | 5106733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3569164 |
End bp | 3570087 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640504483 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001188711 |
Protein GI | 146308246 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGGT TTCAGGAAAT GAAGGTGCTG CTGGCCGTGA CCGAGGCCGA GAGCTTCGCC GGCGGCGCCA AGCTGCTGGG CATCTCGCCG CCCAGTGTGA CCCGCGCCGT CGCGGCGCTG GAGGCGCGCC TCGGCACGCT GCTGCTGGCG CGCAATACCC GTAGCCTTCG CCTGACCGAA GCCGGCCAGC GTTATGTCGA GGACTGCCGG CGCATTCTGC TGGAGCTGGA GGAAGCCGAG GAGCTGGCTG CCGGTGGCAG CGTGCGCCCG CGTGGCCGGC TCACCGTGAC CGCGCCGGTG ATGTTCGGCG AGCTGTTCCT GATTCCGCGC ATCACCCAGT ACCTCGACAG CTACCCGGAT GTGGAGATCA ATGCGCTGCT GGTCGACCGC GTGGTGAACA TGATGGAGGA GGGCATCGAC GTTGCCGTGC GCATCGGTTC GCTGCCCGAA GGTGATCACC AGGCGTTGCA GGTCGGGCAG ATTCGCCCGG TGGTCTGCGC CGCGCCGGCC TTCCTCGACC GCGTCGGGCG GCCGCAGCAT CCGCATGAGG TGCGCGATGC GCCCATCGTC ATGTCCAGCG CCAGCGGCCT GCTCAGCCAT TGGCAGTTCG TCGGCGCCGA TGGCGTGTTC GGCTTCACCC CCACGCCGCG CTTCACCGTC AGCTCCAACC AGGCGGCAAT CGGCGCCGCG CGCCTGGGCT GGGGCTATAC CCGCGTGCTG TCCTACCAGG TGGCTGCCGC AGTGGCGCGC GGCGAGCTCG AGTTGGTGCT CGAAGCCTTC GAACCGCCGG CCTTGCCGGT GCATATCATT CATCAGGGCG GTCGCCAGGT TTCGGCCAAG GTGCGTACCT TCGTCGATCA CTGCGCCGCG AGCTTTCGTG CCGACCCGGC GCTGCGCGCG GCTGGCGCAC CGTCCGCGCC ATGA
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Protein sequence | MDRFQEMKVL LAVTEAESFA GGAKLLGISP PSVTRAVAAL EARLGTLLLA RNTRSLRLTE AGQRYVEDCR RILLELEEAE ELAAGGSVRP RGRLTVTAPV MFGELFLIPR ITQYLDSYPD VEINALLVDR VVNMMEEGID VAVRIGSLPE GDHQALQVGQ IRPVVCAAPA FLDRVGRPQH PHEVRDAPIV MSSASGLLSH WQFVGADGVF GFTPTPRFTV SSNQAAIGAA RLGWGYTRVL SYQVAAAVAR GELELVLEAF EPPALPVHII HQGGRQVSAK VRTFVDHCAA SFRADPALRA AGAPSAP
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