| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3216 |
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| Symbol | |
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| ID | 5106545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3555936 |
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| End bp | 3556787 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640504473 |
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| Product | Ku domain-containing protein |
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| Protein accession | YP_001188701 |
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| Protein GI | 146308236 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1273] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02772] Ku protein, prokaryotic |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.437219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGAG CCATCTGGAA AGGCGCCATC AGCTTCGGCC TGGTGCACAT CCCGGTCGCA
CTGAACTCGG CCACCCGCTC CCAGGGGGTG GACTTCGACT GGCTGGACAA ACGCAGCATG
GAGCCGGTGG GCTACAAGCG GGTGAACAAG GTCACCGGCA AGGAAGTCGG CAAGGAGAAC
ATCGTCAAGG GCGTGGCCTA CGAGAAGGGC CGCTATGTGG TGCTCAGCGA AGAAGAGATT
CGCGCCGCGC ACCCGGAATC GACCCAGACC ATCGACATCT TCGCCTTCGT CGACAGCGAA
CAGATTCCGT TGCAGCACAT CGATACGCCC TACTACCTGG CCCCCGATCG TCGCGGCGAG
AAGGTCTATG CGCTGCTGCG CGAGGCACTG AGCAGTACCG ACAAGGTGGC CCTGGCCCAT
GTGGTGCTGC ACACCCGCCA GCATCTGGCG GCGCTGATGC CGGTGGAGTC GGCGCTGGTG
CTGGTGATGC TGCGCTGGCC CAGCGAGGTA CGTGGCCTGG ATTCGCTGGA GCTGGGGTCG
GCGGTGACCC AGCCCAAGCT GGCCAAGAGC GAGCTGGACA TGGCCAAGCG CCTGATCAAG
GACATGAGCG ATGACTGGCG CCCCGAGGAC TATCAGGACA GCTTCCAGGA ACGCATCCTC
GATCTGGTGG CGCGCAAGGC CAAGGCCGGC AAGATCGAGA ACGTCGAACG GGCCGAGGGC
GAAGAGCAGC GCCGCAGCGC CGATGTCGTC GACCTGACCG AACTCCTCAA GCGCAGCCTC
GGCGGCAAGC CGAAACCCTC GGCGAGCAAG GGTTCCAGCA CGCGCAAGTC GGCCAAGACG
GCGCGCAAGT AA
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| Protein sequence | MPRAIWKGAI SFGLVHIPVA LNSATRSQGV DFDWLDKRSM EPVGYKRVNK VTGKEVGKEN
IVKGVAYEKG RYVVLSEEEI RAAHPESTQT IDIFAFVDSE QIPLQHIDTP YYLAPDRRGE
KVYALLREAL SSTDKVALAH VVLHTRQHLA ALMPVESALV LVMLRWPSEV RGLDSLELGS
AVTQPKLAKS ELDMAKRLIK DMSDDWRPED YQDSFQERIL DLVARKAKAG KIENVERAEG
EEQRRSADVV DLTELLKRSL GGKPKPSASK GSSTRKSAKT ARK
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