| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3214 |
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| Symbol | |
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| ID | 5106543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3553849 |
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| End bp | 3554721 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504471 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001188699 |
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| Protein GI | 146308234 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.727682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA CCTTGCTTGA TGTCGTCCGC GGCTATATCG ACAGTCGCAC CGCCGCGGAC
GGCATGGCGC TCGCACCCAT TGCCGGCCTG ACCATCATCC GCGCGCTGCA GCCCAGCGGG
CTGGACCACG CCATTACCCG ACCGCTGGTG TGCCTGGTGC TGCAGGGCCG CAAACGGGTG
ATGATGGGCA CTGACATATT CACCTTCGGT GCCGGTGATT CCCTGCTGAT CACCGCGGAC
GTACCCACCG TCAGCCAGAT CACCGAGGCC AGTGGCGAGG CGCCGTACAT CTCTCTGGTG
ATCGACCTGG ATCCGGCCCT GCTGACCGAG CTGATGGAGG AGATGAAAGC CGTCCCGGTC
ACCGACGCCG CACCGATCAG GATCGAGCCG ACCGATACCG AGGTGGCCGA GGCCGTGCTA
CGTCTGATGC GTCTGCTGGG GCGGCCGGCA TCGGCTGCCG TGCTGCATGC ATCGCTCATG
CGCGAACTGC ATTACTGGCT GCTGGCTGGC CGCCACGGCC CGGCCATCAG CCGCCTGGGC
TGGCCTGACG GTCATGCGCA GCGCATTGCC AGGGCGGTGA CCGTGCTGCG TACCGAATTC
CATCGCCCAT TGCCGGTGGA GCGCCTGGCT GGCGTGGCGG GCATGAGCGT TTCCTCGTTC
CATCAGCATT TTCGCAAGCA GACCTCCCTG ACGCCGCTGC AGTTTCAGAA GCAGCTGAGG
TTGATCGAGG CGCGTCGCCT GATGCTCGGC GAAGGAGCCT CTGCCAGCAG CGCGGCATTC
AGCGTCGGCT ATGAAAGCGT GTCGCAGTTC AGCCGCGAAT ATCGCCGCCT GTTCGGCCTG
CCGCCGGCGC GCGATACCAC CGTGGCTTGC TGA
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| Protein sequence | MTDTLLDVVR GYIDSRTAAD GMALAPIAGL TIIRALQPSG LDHAITRPLV CLVLQGRKRV
MMGTDIFTFG AGDSLLITAD VPTVSQITEA SGEAPYISLV IDLDPALLTE LMEEMKAVPV
TDAAPIRIEP TDTEVAEAVL RLMRLLGRPA SAAVLHASLM RELHYWLLAG RHGPAISRLG
WPDGHAQRIA RAVTVLRTEF HRPLPVERLA GVAGMSVSSF HQHFRKQTSL TPLQFQKQLR
LIEARRLMLG EGASASSAAF SVGYESVSQF SREYRRLFGL PPARDTTVAC
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