| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3209 |
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| Symbol | |
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| ID | 5106538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3548604 |
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| End bp | 3549542 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640504466 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001188694 |
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| Protein GI | 146308229 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.487782 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACCA GACGCCTTGA TCTCAATCTG CTTGTGACGT TGGAGGCCCT TCTCATCGAG
CAGAACGTGA CCAGGGCGGC CGCCCGTCTG CATTTGAGCC AGCCAGCAGT CAGCGCGCAG
TTGAGCCGCC TGCGCGACGT CTTCAACGAC CCTCTTCTGA TCCCCGCGCA GCGTGGAATG
ACCCCCACCG TCAAAGCCTT GGAGCTGCTC GTGCCGCTTC GCCAAGCACT TGACCAAGTA
AGGGCCACCG TCACTACTCA TCTGAATTTC GAACCCGCGA CGGCGAGCCT GACCGTATCA
ATCGCCTGCA CGGATTACGT GCAGGCGGCC TTGATCAAGC ATCTCGTTGT CGCCATGCGA
CGCGAAGCGC CGGGTGTCCG TATCGCACTG CGCATCCTGG ACGTACCACA GCTGGAGCTG
CAGATGACCC GCGGCGAAGT GGATCTGGCG GTGATCAACA TGAACGGAGC CCCGCCCGCG
CTGCACGCGC AACACCTCTA CGATGAGAGT TACGTGCTGA TCGGGCGTCG TGGGCATCCA
AGCCTACATG CGGGCCTGAC GGTGGATGAG TTCGCGCAGC TGGAACATGT CGTGGTGTCA
CTACGCGGCG GAGGCTTCTC TACCTCGGTG GATAACGCCT TGGTAGCGCG AGGGCTGCGG
CGTAACGTAG TTCTGTCAGC GTCGTCGTTT CTTCCAGTAC CGGAGTTGGT CGCGCAGTCG
GACTGTGTGG CCCTGGTTCC ACGTCGTCTC GTAGAAGGTC GTGACGAGCA GCTGCTGTGC
GTAGCCCCTC CATTGCCGGT GGAAGGTTTT GCGATCGGCA TGTTCTGGCA TGAGCGCTCG
GATGGGCACG CCGGCTTCAG GTGGGTGCGT GAGTTCATCA CTCTGGTAGC CGATTCGCGG
GCATCCGATT CAACCGAGTC AAACAGTCAG GCCGGGTAG
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| Protein sequence | MDTRRLDLNL LVTLEALLIE QNVTRAAARL HLSQPAVSAQ LSRLRDVFND PLLIPAQRGM
TPTVKALELL VPLRQALDQV RATVTTHLNF EPATASLTVS IACTDYVQAA LIKHLVVAMR
REAPGVRIAL RILDVPQLEL QMTRGEVDLA VINMNGAPPA LHAQHLYDES YVLIGRRGHP
SLHAGLTVDE FAQLEHVVVS LRGGGFSTSV DNALVARGLR RNVVLSASSF LPVPELVAQS
DCVALVPRRL VEGRDEQLLC VAPPLPVEGF AIGMFWHERS DGHAGFRWVR EFITLVADSR
ASDSTESNSQ AG
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