| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3206 |
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| Symbol | |
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| ID | 5106535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3546184 |
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| End bp | 3547113 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640504463 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001188691 |
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| Protein GI | 146308226 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.160052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAC TATCTGAGAT GCATGCTTTC GTGGCTGTAG TGGACAGCGG CAGTATTTCC
GAGGCCGCTC GTCGTTTGGG CACGGCCAAG TCGATGGTTT CCCAGCGCAT TCAACAACTG
GAGAAACGCC TGGGCTGCAT CCTGCTGGAG CGCGGCCGGC AGACTCGCCT GACTGAGGCG
GGGGAGGTTT TTTACCGTCA TTGCACGGCA ATTCTCGCTG ACATAGAAAA TGCCGAGAAC
GCCGTTCTGA CCTCTCAGTC CAGTGTCCGT GGAAATCTGC GCATCGCAGC TCCGATGGCG
TTCGGCATGC GATATCTGAC GCCGATCCTG GCCTCTTTTG CCAAGCAATA CCCTGAGTTG
TATCTGGACG TGGAGTTCGA CGACCGGCGC GTCAACCTGC ATGAGGAGGG TTTTGATGCG
GCGGTGCGTA TAGGCGAGCT GCCGGACTCT TCCCTGGTAG CCAAGATCAT TACTCCCAAC
CGCCATATCA TCTGCGCCAG TCCTGATTAC CTGGATGCTC ATGGCACACC AAGGACACCG
CAGGACCTGG CTCAGCATTT CGGCATGCTG TACGTGAATC GAGAGCCACA TGGCATGTGG
ACGCTACCGG TGAATGACAC ATTGGAGTCA TTTCGCGTGC GCTGTCGGAT GCGCACCAAC
TGTGGTCATC AGCTGATGGA TGCGGCAAAG GCGGGGCTTG GGCTTGCCAT ACTGCCCACA
TTCCTGGCCG CGCAGGCCAT CGTGGATGGT GAGTTGATAG AGGTACTGGA GCCCTATGCG
CCCCGTGGCG GCAATATATC CGTGGTTTAT CGTCAGTCGC AGAGAGCCTC GCCCAAGCTG
CGTGCGCTAA GTGGCTTTCT CAGTGAGCGG ATCGGTAACC CACCGATCTG GGATCAGATG
CTGACAGACC ATATGCGTCC ACAGGGTTGA
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| Protein sequence | MNKLSEMHAF VAVVDSGSIS EAARRLGTAK SMVSQRIQQL EKRLGCILLE RGRQTRLTEA
GEVFYRHCTA ILADIENAEN AVLTSQSSVR GNLRIAAPMA FGMRYLTPIL ASFAKQYPEL
YLDVEFDDRR VNLHEEGFDA AVRIGELPDS SLVAKIITPN RHIICASPDY LDAHGTPRTP
QDLAQHFGML YVNREPHGMW TLPVNDTLES FRVRCRMRTN CGHQLMDAAK AGLGLAILPT
FLAAQAIVDG ELIEVLEPYA PRGGNISVVY RQSQRASPKL RALSGFLSER IGNPPIWDQM
LTDHMRPQG
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