| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3196 |
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| Symbol | |
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| ID | 5106525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3535152 |
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| End bp | 3536042 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640504453 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_001188681 |
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| Protein GI | 146308216 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.00788547 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGCAA CGCTGCCCGC CCTGGCCTTT GCCGGGATTG GTCTGATGGG CCTGCCGATG
ACCCGCCGCC TGCTCGCCGC AGGCTATCCG CTGACCCTCT GGAACCGCAC GCCGGACAAG
TGCGCGCCGC TGCTGGAGCT GGGTGCGCAT CGCGTGGAGA ACCCCGCCGA ACTGTGCCGC
GATGCCAGTG TGGTGATGCT CTGCCTGGCC AATACCGAGG TGGTGCGTGA GGTGGTGTTC
GGCCCGGGTG GCATCGTCGA GGGCGCGCGG CCGGGGCAGT TGCTGGTGGA TTTCTCCAGC
CTGGAACCGG CGGCTACCCG TGAAATGGCC GCCGAACTGG AGGCGCGTAC CGGCATGCGC
TGGGTGGATG CGCCGGTCTC CGGTGGCACG CCCGGCGCCG AGGCCGGCAC GCTGGCGATC
ATGGCCGGCG GCCGGGACGA AGACGTGGAG CGCGTGCGTC CGGTGCTGGC GCATCTGGGC
CAGCGTCTGA CGCGCATGGG CGAGGTGGGC GCCGGGCAGG TGACCAAGGT GTGCAACCAG
ATGATCGTCG CCTGCAACGC CCTGGTGATC GCCGAGGTAG TGGCGCTGGC CGAGCGCTCC
GGCGTCGATG CCAGCCTGAT TGCACCGGCG CTGGCCGGAG GTTTCGCCGA TTCCAAACCG
CTGCAGATTC TCGCCCCGCA GATGGCCGCC AGCCAGTTCG AGCCGATCAA GTGGCACGTG
CGCACGCTGC TCAAGGACCT CGACACCGCG GTCAAACTAT CCCGTGAGCA GGGCAGCGCC
ACGCCCATGA GCGGCCTGGC CGCGCAGCTG ATGCGTCTGC ACGGCAGCCA GGGCAACTTG
GAGCGCGACC CAGCCACGCT GGTGGAACTG CTGCGCGAGC AATGCCCATG A
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| Protein sequence | MTATLPALAF AGIGLMGLPM TRRLLAAGYP LTLWNRTPDK CAPLLELGAH RVENPAELCR
DASVVMLCLA NTEVVREVVF GPGGIVEGAR PGQLLVDFSS LEPAATREMA AELEARTGMR
WVDAPVSGGT PGAEAGTLAI MAGGRDEDVE RVRPVLAHLG QRLTRMGEVG AGQVTKVCNQ
MIVACNALVI AEVVALAERS GVDASLIAPA LAGGFADSKP LQILAPQMAA SQFEPIKWHV
RTLLKDLDTA VKLSREQGSA TPMSGLAAQL MRLHGSQGNL ERDPATLVEL LREQCP
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