Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3189 |
Symbol | |
ID | 5106518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3524774 |
End bp | 3525919 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640504446 |
Product | glucose sorbosone dehydrogenase |
Protein accession | YP_001188674 |
Protein GI | 146308209 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0411882 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGCC TGAAACCACT CGCCGCCTTC GCCATGGTCG CCCTGTTCGG TTGCCAGTAC AGCCTCGCCG AAGACCGGCA ATTGTCCTCC GAATTGGGGC CCTTACAGGT CCATACCGTC GCCGAGGGGC TGGCCAATCC CTGGGCGGTG GCGTTCCTCC CGGATGGCCA GGGTTACCTG GTGACCGAGC GCCCTGGCGC ACTGCGCCGG GTCAGCGCCG AAGGCCAGCT GTCCGAGCCG CTGCGCGGCG TGCCGGAAGT GTTCGCGGTG GGCCAGGGCG GTTTGCTCGA CGTGGTGCTG TCGCCCGATT TCGCCGAAGA CCGGCTGGTC TATCTGTCCT ACGCCGAGGC GGGCGACGGC GCTGCCGGTA CCGCGGTCGG GCGCGGCAAG CTGTCGGCCG ATGCCACGGC GCTGGAGGAT TTCGAGGTGA TCTTCCGCCA GCAGCCCAAG CTCTCCAGCG GCACGCATTT CGGCTCGCGC CTGGTGTTCG ACCGTGACGG TCACCTGTTC ATCGCCCTGG GCGACAACAA CGACCGACCC ACCGCCCAGG ACCTCGACAA GCTGCAGGGC AAGCTGGTGC GCATCTTCCC GGACGGGCGC ATCCCCGAGG ACAACCCCTT CGTCAGCCGC GAAGGCGCCC GTGACGAGAT CTGGTCCTAC GGCCATCGCA ACCAGCAGGG CGCCGCGCTC AATCCCTGGA GCGGCCGCCT GTGGACCCAT GAGCATGGCC CGCGCGGCGG CGACGAAATC AACGTTCCCG AGGCGGGCAA GAACTATGGC TGGCCGCTGG CGACCCACGG GGTGAACTAC TCGATGCTGG CCATCCCCGA GGCCAAGGGC AAGACGGTGG CAGGCACCGA ACCGCCGCAT CATGTCTGGG AAAAGTCCCC GGCGATCAGT GGCATGGCCT TCTACGATGC CGAGCGCTTC CCGGCCTGGC AGAACAATCT GTTCATCGGC GCATTGTCCA GCCAGGCGCT GATTCGTCTG CAGCTCGATG GCGACAGGAT CGTGCATGAG GAGCGTCTGC TGCAGCCGCT CAAGGCGCGG GTGCGCGACG TGCGGCAGGG GCCGGACGGT TATCTGTATG TGCTGACGGA TGCGCCGAAG GGGCAGTTGC TGCGTCTGGG GCTGGCGAGC GAGTGA
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Protein sequence | MPRLKPLAAF AMVALFGCQY SLAEDRQLSS ELGPLQVHTV AEGLANPWAV AFLPDGQGYL VTERPGALRR VSAEGQLSEP LRGVPEVFAV GQGGLLDVVL SPDFAEDRLV YLSYAEAGDG AAGTAVGRGK LSADATALED FEVIFRQQPK LSSGTHFGSR LVFDRDGHLF IALGDNNDRP TAQDLDKLQG KLVRIFPDGR IPEDNPFVSR EGARDEIWSY GHRNQQGAAL NPWSGRLWTH EHGPRGGDEI NVPEAGKNYG WPLATHGVNY SMLAIPEAKG KTVAGTEPPH HVWEKSPAIS GMAFYDAERF PAWQNNLFIG ALSSQALIRL QLDGDRIVHE ERLLQPLKAR VRDVRQGPDG YLYVLTDAPK GQLLRLGLAS E
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