| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3171 |
|---|
| Symbol | |
|---|
| ID | 5106500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 3509926 |
|---|
| End bp | 3510207 |
|---|
| Gene Length | 282 bp |
|---|
| Protein Length | 93 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640504427 |
|---|
| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_001188656 |
|---|
| Protein GI | 146308191 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.145365 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGCG CCACTGCCCG TCACATCCTG GTTGCCAGCG AAGACAAGTG CAACGAACTG
AAAGCCGCCA TCGAAGGTGG CGCCGACTTC GCCCAGCTGG CGAAGGACAA CTCCAGCTGC
CCGTCCGGCC GTAACGGCGG CGACCTGGGC TCGTTCGGCC CCGGCCAGAT GGTCAAGGAA
TTCGACACCG TGGTGTTCAG CGCACCGGTC GGCGTGGTCC AGGGCCCGGT CAAGACCCAG
TTCGGTTATC ACCTGCTGGA AGTCACCAGC CGCCAGGACT GA
|
|---|
| Protein sequence | MARATARHIL VASEDKCNEL KAAIEGGADF AQLAKDNSSC PSGRNGGDLG SFGPGQMVKE
FDTVVFSAPV GVVQGPVKTQ FGYHLLEVTS RQD
|
|---|
| |