| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3169 |
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| Symbol | |
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| ID | 5106498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3508359 |
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| End bp | 3509198 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640504425 |
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| Product | Allergen V5/Tpx-1 family protein |
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| Protein accession | YP_001188654 |
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| Protein GI | 146308189 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.635999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.126682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTGC CCTTTTTCGC CGTCGTTCTG ACGCTGGGTC TGTTCGCCGT CACGGCGCAG
GCAGCGGACG AGGCGCGGCT GATCGAAGCC ATCAATGCCT ACCGCGGCGA GGTGCAGCGC
TGCGGCGTGC AGGTTTCCGA GCCACTGCCG CCGTTGAGCA GCGATACGCG TCTGCTGCTG
CCGGCGGCCG GCACCGGTGA CCTGCAGCAG GCGCTGAGTG CGTCGGGCTA TCCGCTGGTC
AATGTGCAGG CCATCAGCCT GTCCGGTCCG CGCGATGCGC AGGCGGCGAT GCAGGCGCTG
GCGGAGAGCT TCTGCCGGGT GCTGCTCGAC CCGCAGTTCA TCGACATCGG CGTCAGCCGC
ATGGACCGCG ACTGGCGCAT CGTCCTGGCG CGCCCACTGC TCAGTGGCCG CCTCGGCGAC
TGGCAGGCCG AAGGACAGAA CCTGCTGCAG CGCATCAACG CCGCCCGCGC CCAGGCGCGC
CAGTGCGGCG CTCAGCAGTT CGCCGCAGCC GCACCGCTGA CCTGGAGCGC GGAGCTGGCC
ACGGCAGCCG AGGCGCATAG CCGCGCCATG GCCAATGACA ACTTCTTCGC TCACCAGGGC
CGCGACGGCC GGACTCCGGG GGATCGTGCG GAGCTGGCCG GCTATGGCGG TGGGCGCATT
GGCGAGAACA TCGCCGCTGC ATTGGACACG GCTGACAAGG TGGTCGAAGG CTGGCTGGCC
AGCCCGGCTC ATTGCGCCAA CCTGATGAAC CCACAGTTCG AGGAACTCGG CGCCGCCTAC
GGCAGCGACC CGCAAAGCGA CGCCGGCATC TACTGGACCG CGCTGTTCGG CGGACGCTGA
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| Protein sequence | MRLPFFAVVL TLGLFAVTAQ AADEARLIEA INAYRGEVQR CGVQVSEPLP PLSSDTRLLL
PAAGTGDLQQ ALSASGYPLV NVQAISLSGP RDAQAAMQAL AESFCRVLLD PQFIDIGVSR
MDRDWRIVLA RPLLSGRLGD WQAEGQNLLQ RINAARAQAR QCGAQQFAAA APLTWSAELA
TAAEAHSRAM ANDNFFAHQG RDGRTPGDRA ELAGYGGGRI GENIAAALDT ADKVVEGWLA
SPAHCANLMN PQFEELGAAY GSDPQSDAGI YWTALFGGR
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