| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3166 |
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| Symbol | |
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| ID | 5106495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3505208 |
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| End bp | 3507217 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640504422 |
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| Product | peptidase U32 |
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| Protein accession | YP_001188651 |
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| Protein GI | 146308186 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.749383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.18817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTGC CCAAACACCA CCTGGAACTG CTCAGCCCTG CGCGTGATGT CGAGATCGCC
CGCGAGGCCA TCCTCCACGG CGCCGACGCC GTCTATATCG GCGGCCCGAG CTTCGGCGCA
CGGCACAACG CCTGCAACGA AGTGAGCGAT ATCGCCAGGC TGGTGGAGTT CGCCCGGCGC
TACCATGCGC GGGTGTTCAC CACGCTCAAC ACCATTTTCC ACGATGACGA ACTGGAGCAG
GTGCGCACGC TGATCCACCA GCTCTACGAC GCGGGCGTGG ATGCGCTGAT CGTGCAGGAC
ATGGGGGTGA TGGAGCTGGA TATTCCGCCC ATCGAGCTGC ATGCCAGCAC CCAGACCGAC
ATCCGCACCC TGGCGCGGGC CAAGTTCCTC GACCAGGCCG GGTTCTCCCA GCTGGTGCTG
GCGCGCGAGC TGAACCTGCA GGAAATCCGT GCGATTGCCG ATGAAACCGA TGCCGCCATC
GAATTCTTCA TCCATGGCGC GCTGTGCGTG GCCTTCTCCG GCCAGTGCAA CATCTCCCAT
GCACAGACCG GGCGCAGCGC CAACCGCGGC GACTGCTCGC AGGCCTGCCG CCTGCCCTAC
ACCCTCAAGG ACGAGAAAGG CGGTGTGATC GCCTACGAGA AACACCTGCT GTCGATGAAG
GACAACAACC AGAGCGCCAA CCTGCGCGCC CTGGTCGAGG CCGGCGTGCG CTCGTTCAAG
ATCGAGGGCC GCTACAAGGA TGTGGCCTAC GTGAAGAACA TCACCGCCCA CTACCGCCGC
GAACTCGACG CCATCCTCGA AGACCGCCCG GACCTGGCCC GCGCCTCCAG CGGTCGTACC
GCGCACTTCT TCGTGCCCGA TCCGGACAAG ACCTTCCACC GTGGCAGCAC CGACTACTTC
GTCACCGAGC GCAAGGTGGA TATCGGCGCC TTCGACTCGC CGACCTTCAC TGGCCTGCCC
GTCGGCCAGG TCGAGAAGGT GAACAAGCGC GACCTGATCG CCGTCACCCA CGAGCCCTTG
TCCAACGGCG ACGGCCTCAA CGTGCTGGTC AAGCGCGAGG TGGTGGGCTT CCGCGCCAAT
ATCGCCGAAC TGAAAGGCGA GTTCGAAGAA GACGGCGAGA AGCGCTACCG CTACCGCGTC
GAGCCCAACG AGATGCCCGA GGGCCTGTTC CGTCTGCGCC CGAATCACCC GCTGAGCCGC
AACCTCGACC ACAACTGGCA GCAGGCGCTG CAGCGCACCA GCGCCGAGCG CCGTATCGGC
GTCAGCTGGA AGGCCGTACT GCGAGAGGAT GCCCTGACGC TCACCGCCAC CAGCGAAGAA
GGCATCAGCG TCGAAGTCGC CCTGCCCGGC CCGTTCGGCG CGGCCAACAA ACCGGAACAG
GCGCTGGACG GCCTGCGCGA TCTGCTCACT CAGCTCGGCA CCACCATCTA CCATGCCCAG
AGCGTCAGCC TGGATGCACC GCAGGCCTTC TTCGTGCCCA ACTCGCAGCT CAAGGCACTA
CGCCGCGAGG CCATCGAGGC GCTGACCGAA GCGCGCGTCG CCGCTCACCC GCGCGGCAGC
CGCAAGGCCG AAACCGATCC GGCGCCGGTG TATCCGGAAT CGCACCTGAG CTTCCTCTAC
AACGTCTACA ACCAGAAGGC CCGCGACTTC TACCATCGGC ATGGCGTGCA ATTGATCGAT
GCCGCCTACG AGGCGCACGA GGAAACCGGC GAAGTGCCGG TGATGATCAC CAAGCACTGC
CTGCGCTTCT CCTTCAACCT GTGCCCCAAG CAGGCCAAGG GCGTGACCGG CGTGCGCACC
AAGGTGGCGC CGATGCAACT GGTGCATGGC GATGAAGTGC TGACCCTGAA GTTCGACTGC
AAGCCGTGCG AGATGCACGT GATCGGCAAG ATGAAGGGCC ATATCCTCGA CCTGCCCCAG
CCGGGCAGCG CCGCCGCCCA GGTGGTCGGC CACATCAGCC CGGACGACCT GCTCAAGACC
ATTCGCCAGA AACCGGGTTA CAGCCACTAA
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| Protein sequence | MSLPKHHLEL LSPARDVEIA REAILHGADA VYIGGPSFGA RHNACNEVSD IARLVEFARR
YHARVFTTLN TIFHDDELEQ VRTLIHQLYD AGVDALIVQD MGVMELDIPP IELHASTQTD
IRTLARAKFL DQAGFSQLVL ARELNLQEIR AIADETDAAI EFFIHGALCV AFSGQCNISH
AQTGRSANRG DCSQACRLPY TLKDEKGGVI AYEKHLLSMK DNNQSANLRA LVEAGVRSFK
IEGRYKDVAY VKNITAHYRR ELDAILEDRP DLARASSGRT AHFFVPDPDK TFHRGSTDYF
VTERKVDIGA FDSPTFTGLP VGQVEKVNKR DLIAVTHEPL SNGDGLNVLV KREVVGFRAN
IAELKGEFEE DGEKRYRYRV EPNEMPEGLF RLRPNHPLSR NLDHNWQQAL QRTSAERRIG
VSWKAVLRED ALTLTATSEE GISVEVALPG PFGAANKPEQ ALDGLRDLLT QLGTTIYHAQ
SVSLDAPQAF FVPNSQLKAL RREAIEALTE ARVAAHPRGS RKAETDPAPV YPESHLSFLY
NVYNQKARDF YHRHGVQLID AAYEAHEETG EVPVMITKHC LRFSFNLCPK QAKGVTGVRT
KVAPMQLVHG DEVLTLKFDC KPCEMHVIGK MKGHILDLPQ PGSAAAQVVG HISPDDLLKT
IRQKPGYSH
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