| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3165 |
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| Symbol | |
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| ID | 5106494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3504406 |
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| End bp | 3505050 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504421 |
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| Product | hypothetical protein |
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| Protein accession | YP_001188650 |
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| Protein GI | 146308185 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA |
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| TIGRFAM ID | [TIGR02292] yecA family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.550145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0595917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAACA GAGGGTTGGA GAAGCTCGAT CAGTGGCTGC TCAAATATGG CAATGACGAT
TCGATCCTCT CTGCCAGCGA GCTGGACGGC TACTTCGCCG CCATCGTCTC CGGCCCGCGC
CAGGTTGCGC CCGCCGTCTG GTATGCGGCG ATCTGGGCCG ACCAGCCGCC ACAGTGGCCC
AGCGACAAGG ACGGCGAGCG CTTCATGAAG CTGGCGGTGG AGCTGATGAG CGAGGCCACC
TACATGCTCA GCGAGGAGCC GGACGACTAC GAGGCGATCT TCCTCGCCGA TGACAACGGC
AAGGGCGAGA AGCTGATCGT CTCCGAATGG TGCGCGGGCT ACCTGCGCGG CGCGGCAGTC
GCCGGCTGGC TCGACGAAGC GCTGCCCGAT TCGGTGGCGG CGGCGCTGAA GCTGATCGCC
CTGCACGGTG ACGAGAGCGG CGCGGAAACG CTCAAGGCCA TGACCGATGC CGAGTACGAC
GCCAGCACGG CGATGATCGA GCCGGCCGCC GTCGCCCTCT ACGAATACTG GCAGGAGAAC
CTGCAGCCAG TGCTCCCGGT GCGCCGCGAG GAAGCCAAGG TAGGTCGCAA CGACCCGTGC
ACCTGCGGCA GCGGCAAGAA ATACAAGCAG TGCTGCATGC GCTGA
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| Protein sequence | MDNRGLEKLD QWLLKYGNDD SILSASELDG YFAAIVSGPR QVAPAVWYAA IWADQPPQWP
SDKDGERFMK LAVELMSEAT YMLSEEPDDY EAIFLADDNG KGEKLIVSEW CAGYLRGAAV
AGWLDEALPD SVAAALKLIA LHGDESGAET LKAMTDAEYD ASTAMIEPAA VALYEYWQEN
LQPVLPVRRE EAKVGRNDPC TCGSGKKYKQ CCMR
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