Gene Pmen_3164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3164 
Symbol 
ID5106493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3503815 
End bp3504291 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content67% 
IMG OID640504420 
Productproteinase inhibitor I11, ecotin 
Protein accessionYP_001188649 
Protein GI146308184 
COG category[R] General function prediction only 
COG ID[COG4574] Serine protease inhibitor ecotin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.403723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0818337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCC TCAAACTGCC CCTTCTCTCC CTCGCCTGCG CGCTGCCGCT GGTCGCCTGC 
GCTGCCACCC CCGAAGCGCT CAAGCCCTAC CCCGCCGCCG CCGACGGCTA CATCCGCCAT
GTGATCGAGC TGCCGGCGCA AGCCAACGAA GCCGAGCACA AGGTGGAGAT CATCGCCGGC
AAGACCCTGG AAGTGGATTG CAACCAGCAG CGCCTGGGTG GTCAGTGGCA GGAGAAGACC
GTCGAAGGCT GGGGCTACAG CTATTACGAG CTGAGCCAGG TCGGCCCGGC GATGAGCACG
CTGATGGCCT GCCCGGACGG CACACGCAAG CAGGCGTTCG TACGTGTCGG CGGCGAGCCG
CATCTGGTGC GCTACAACAG CAAGCTGCCG CTGGTGATCT ACGCGCCGAA GGATGTCGAG
GTGCGCTACC GCCTGTGGTC CGCAGCAGCC GAAACCAGCA CCGCGCCGCG TCAGTAA
 
Protein sequence
MTRLKLPLLS LACALPLVAC AATPEALKPY PAAADGYIRH VIELPAQANE AEHKVEIIAG 
KTLEVDCNQQ RLGGQWQEKT VEGWGYSYYE LSQVGPAMST LMACPDGTRK QAFVRVGGEP
HLVRYNSKLP LVIYAPKDVE VRYRLWSAAA ETSTAPRQ