| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3156 |
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| Symbol | |
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| ID | 5106485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3498087 |
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| End bp | 3498971 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640504412 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001188641 |
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| Protein GI | 146308176 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0970291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTGGA ACGACCTGAA GTATTTCCTC GCGGTGGCGC GAAGCGGGAG TCTCACCCAG
GCGGCCACGG AGCTGGCCGT GAGCCAGTCC ACCGTCAGCC GGCGCATCAC CGAGCTGGAG
CAGAGCATCG GCACCATCCT CTTCCAGCGC CATCAGACCG GTTATTTCGT GACGGACGAA
GGTGGTGAGC TGCTGTGCCA TGCCGAGCGC GTCGAAGAAA GCATCATGGC CTTGGAGCGG
GGCGCCGCAG GGCTGGACAA GAAACCGGCT GGAAGCGTGC GGCTGGCCAC CTCCGAGAAC
CTGGCCACCG ACCTGATCAT TCCCGCCCTG CCGGCATTCC GCGAGCGCTA CCCGGGCATC
TGCCTCGAAA TCATCACCAG TACCGTCACG GCGGAGCTTA ACCGGCGCGA AGCGGACATC
GCTCTGCGCG TGGTGCGGCC AAGCCGGGGC AACCTGAAGG TCAGACGCAT CGGCCATATG
ACCTACTCGG TCTACGGCAG CCGCGGCTAC CTCGAGCGCC ACCCCCATAT CGACGGCGAG
CCGCTGGGCG GGCGGCACCT GATCACCTGG GACGACAGCC ATGGCTTCAT GCCGGCTGCG
GCCTGGCTCG CGCGGGAGCA CCCCGGCTGC AAGGTCGCGC TGGTCACCAG CAGCCTGCCC
ACGCAGATCG CCGCCGTGCG CGCCGGCCTG GGCCTGGCCG TGATCCCTGA CTTTCTGGCG
GTGAAGGAGG ACTTCATTGC CGTCATCCCG GCCGAGCAGT TGTTCAGCGC CGAACTCTGG
CTGGTGACCC ATGCCGACCT TGTCGCCTCC GCCCGGGTAC GGGCCGTCGC CGACTTTCTC
AGCGAGTGCG TGGTGCAGGG CAGCCCCGAG CTGGCGCTGC AGTGA
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| Protein sequence | MDWNDLKYFL AVARSGSLTQ AATELAVSQS TVSRRITELE QSIGTILFQR HQTGYFVTDE
GGELLCHAER VEESIMALER GAAGLDKKPA GSVRLATSEN LATDLIIPAL PAFRERYPGI
CLEIITSTVT AELNRREADI ALRVVRPSRG NLKVRRIGHM TYSVYGSRGY LERHPHIDGE
PLGGRHLITW DDSHGFMPAA AWLAREHPGC KVALVTSSLP TQIAAVRAGL GLAVIPDFLA
VKEDFIAVIP AEQLFSAELW LVTHADLVAS ARVRAVADFL SECVVQGSPE LALQ
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