| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3151 |
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| Symbol | |
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| ID | 5106480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3489275 |
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| End bp | 3492181 |
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| Gene Length | 2907 bp |
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| Protein Length | 968 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640504407 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001188636 |
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| Protein GI | 146308171 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.474699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACCG ACACCACTCG CGAGAACCCG CAGGCCGTGG CGCCGCAGGG CGCCGATTCC
TCCCAGGATC TGGCGGCCAC CGCCCCCGGC CAGCTGCGCG TGATCAAGCG CAACGGCACT
GTCGTCCCCT ACACCGATGA CAAGATCACC GTCGCCATCA CCAAAGCGTT CCTCGCCGTG
GAGGGCGGTA CCGCCGCCGC CTCGTCGCGT ATCCATGACA CCGTCGCGCG CCTGACCGAG
CAGGTCACCG CCACCTTCAA GCGCCGCATG CCGTCCGGCG GCACCATCCA TATCGAAGAG
ATCCAGGACC AGGTCGAACT GGCCCTGATG CGCGCCGGCG AGCAGAAAGT CGCCCGCGAC
TACGTGATCT ACCGCGAAGC CCAGGCCAAC AAGCGCAAGG CCAGTGCCGG CAGCGAAATC
GCCCAGCCGC ACCCGAGCAT CCGCATCACC GCCGCCGACG GCAGCCTGCA GCCGCTGGAC
ATGGGCCGCC TGCAGACCAT CATCCGCGAA GCCTGCGAAG GCCTGGCCGA AGTGGACGGC
GCGCTGATCG AGCGTGAAAC CCTGAAGAAC CTGTACGACG GCGTGGCCGA GAAGGACGTC
AACACCGCCC TGGTGATGAC CGCCCGTACC CTGGTCGAGC GCGAGCCGAA CTACAGCTAC
GTCACCGCCC GCCTGCTGAT GGACAACATC CGCGCCGAGG CCCTGACCTT CCTGGGCATC
ACCCAGAGCG CCACCCACCA CGAGATGGTC GACCTGTACG CCAAGGCCCT GCCGGCCTAC
GTCGACAAGG GCGTGGAGTT CGAGCTGCTC GATCCCAAGC TGAAAGAGTA CGACCTGGAG
AAGCTGGGCA AGGCGCTGAA CCACGAGCGC GACCAGCAGT TCACCTACCT GGGCCTGCAG
ACTCTGTACG ACCGTTACTT CATCCACAAG GACGGCATCC GCTTCGAACT GCCGCAGGTA
TTCTTCATGC GCGTGGCCAT GGGCCTGGCC ATCGAAGAGC CGAAGAACCG CGAAGACCGC
GCCATCGAGT TCTACAACCT GCTGTCCTCG TTCGACTACA TGGCGTCGAC CCCGACCCTG
TTCAACGCCG GCACCCTGCG TCCGCAGCTG TCGTCCTGCT ACCTGACCAC CGTGCCGGAC
GACCTGTCGG GCATCTACAG CGCCATCCAC GACAACGCCA TGCTGAGCAA ATTCGCTGGC
GGTCTGGGCA ACGACTGGAC CCCGGTGCGC GCGCTGGGCT CCTACATCAA GGGCACCAAC
GGCAAATCCC AGGGCGTCGT GCCCTTCCTC AAGGTGGTCA ACGACACCGC CGTGGCGGTC
AACCAGGGCG GCAAGCGCAA GGGCGCGGTC TGCGCCTACC TGGAAACCTG GCACATGGAC
ATCGAGGAAT TCCTCGAGCT GCGCAAGAAC ACCGGTGACG ACCGTCGTCG TACCCACGAC
ATGAACACCG CCAACTGGAT TCCGGACCTG TTCATGAAGC GCGTCTTCGA AGACGGCAAG
TGGACCCTGT TCTCCCCAAG CGAAGTGCCG GACCTGCACG ACCTGACCGG CAAGGCCTTC
GAAGAGCGCT ACGAGTACTA CGAAGCCCTG ATCGAGTACG GCAAGATCAA GCTGTACAAG
ACCATCCAGG CCAAGGACCT GTGGCGCAAG ATGCTCTCGA TGCTGTTCGA GACCGGCCAC
CCCTGGCTGA CCTTCAAGGA CCCGTGCAAC CTGCGCAGCC CGCAGCAGCA CGTGGGCGTG
GTGCACAGCT CCAACCTGTG CACCGAGATC ACCCTGAACA CCAACAAGGA CGAGATCGCC
GTCTGCAACC TGGGCTCGGT CAACCTGGTC AACCACATCG TCGACGGCAA GCTGGACATC
GAGAAACTCG GCCGCACCGT GAAGACCGCC GTGCGCATGC TCGATAACGT CATCGACATC
AACTACTACA GCGTGCCGCA GGCGCGTAAC TCCAACCTCA AGCACCGTCC GGTCGGCCTC
GGCCTGATGG GCTTCCAGGA CGCCCTGTAC CTGCAGCACA TCGCCTACGG CTCCGACGCG
GCCATCGAGT TCGCCGACCG CTCCATGGAA GCCATCAGCT ACTACGCCAT CCAGGCCTCC
TGTGACCTGG CCGAAGAGCG CGGCGCCTAC AGCACCTTCG AAGGCTCGCT GTGGAGCAAG
GGCATCCTGC CGCTGGATTC GCAGCAGATC CTGATCGAAG CCCGTGGCCA GAAGTACATC
GACGTCGACC TGTCCGAGTC GCTGGACTGG GCGCCGCTGC GCGAGCGCGT GAAGAAAGGC
ATTCGCAACT CGAACATCAT GGCCATCGCG CCGACCGCGA CCATCTCCAA CATCATTGGC
GTGTCGCAGT CCATCGAGCC GACCTACCAG AACCTGTACG TGAAATCGAA CCTCTCCGGC
GAATTCACCG TGATCAACCC CTACCTGGTG CGCGACCTGA AGAACCGCGG CCTGTGGGAC
CCGGTCATGG TCAACGACCT GAAGTACTAC GACGGCTCCG TGCAGCAGAT CGAGCGCATC
CCGCAGGACC TGAAAGACCT GTACGCCACC GCCTTCGAAG TGGAAACCAA GTGGATCGTC
GACGCTGCCA GCCGTCGCCA GAAGTGGATC GACCAGGCGC AGTCGCTGAA CCTGTACATC
GCCGGCGCCT CGGGCAAGAA GCTGGATGTG ACCTACCGCA TGGCCTGGTA CCGTGGCCTG
AAAACCACCT ACTACCTCCG TGCCCTGGCC GCCACCAGCA CCGAGAAGTC CACCATCAAC
ACCGGCAAGC TGAACGCGGT TTCCGCCGGT GGTGACGAAG GCTTCTCGGC CAAGGCCCAG
GCCCCTGCCC AGCAGGCCGC TCCGGCCCCG GCGCCCGTAC CAAAGGCCTG TGCCATCGAC
GAACCCGACT GCGAAGCTTG TCAGTAA
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| Protein sequence | MHTDTTRENP QAVAPQGADS SQDLAATAPG QLRVIKRNGT VVPYTDDKIT VAITKAFLAV
EGGTAAASSR IHDTVARLTE QVTATFKRRM PSGGTIHIEE IQDQVELALM RAGEQKVARD
YVIYREAQAN KRKASAGSEI AQPHPSIRIT AADGSLQPLD MGRLQTIIRE ACEGLAEVDG
ALIERETLKN LYDGVAEKDV NTALVMTART LVEREPNYSY VTARLLMDNI RAEALTFLGI
TQSATHHEMV DLYAKALPAY VDKGVEFELL DPKLKEYDLE KLGKALNHER DQQFTYLGLQ
TLYDRYFIHK DGIRFELPQV FFMRVAMGLA IEEPKNREDR AIEFYNLLSS FDYMASTPTL
FNAGTLRPQL SSCYLTTVPD DLSGIYSAIH DNAMLSKFAG GLGNDWTPVR ALGSYIKGTN
GKSQGVVPFL KVVNDTAVAV NQGGKRKGAV CAYLETWHMD IEEFLELRKN TGDDRRRTHD
MNTANWIPDL FMKRVFEDGK WTLFSPSEVP DLHDLTGKAF EERYEYYEAL IEYGKIKLYK
TIQAKDLWRK MLSMLFETGH PWLTFKDPCN LRSPQQHVGV VHSSNLCTEI TLNTNKDEIA
VCNLGSVNLV NHIVDGKLDI EKLGRTVKTA VRMLDNVIDI NYYSVPQARN SNLKHRPVGL
GLMGFQDALY LQHIAYGSDA AIEFADRSME AISYYAIQAS CDLAEERGAY STFEGSLWSK
GILPLDSQQI LIEARGQKYI DVDLSESLDW APLRERVKKG IRNSNIMAIA PTATISNIIG
VSQSIEPTYQ NLYVKSNLSG EFTVINPYLV RDLKNRGLWD PVMVNDLKYY DGSVQQIERI
PQDLKDLYAT AFEVETKWIV DAASRRQKWI DQAQSLNLYI AGASGKKLDV TYRMAWYRGL
KTTYYLRALA ATSTEKSTIN TGKLNAVSAG GDEGFSAKAQ APAQQAAPAP APVPKACAID
EPDCEACQ
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