| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3149 |
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| Symbol | |
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| ID | 5106478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3486042 |
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| End bp | 3487682 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640504405 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001188634 |
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| Protein GI | 146308169 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.305074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0948904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCGGC CGTGGGCGAT TGACCGGCCT GCCATGAACT CCATCTTCCT GCGCATCTAC
GGCGGCATGC TCGCCGCACT GGTGCTGGTG GCGCTGCTGG GCGTCGGCAC CCTGCATCTG
GTCAACGAGG TGCGGGGCGA TCAGTACCGC GAGGGGCTGG CGCGCGGCAC CTTCCGCCTG
ATGGCCGACA ACCTGGTGCC GATGAACGAG GTGGAGCGGC GTCGGGCGCT GGCGGTGTGG
TCGCGCCTGC TCGGTATTCC GCTGCAGCTG CAGGCAATGA GCGACGTGCC GCTGGAAGCC
GGCGAGCGCA ACCGTCTGCA GCGTGGCCAG GTGCTGGTGC GCCAGACCGG CCCGCACTCG
GCCAAGGTCT ACGGCCTGCT CGACGGCAAG CCGGGTCTGC TGCTGACCGG CGAGATCCAG
CAGATCAGCG AGCAGCTGGC GCGGGCCACC AACTACCTGC TGATCGACGA GCTGATCCGC
TACCCGGTGA ACGAGCAGCC GCAGCGTCTG GCCGAGCTGA AAACCGCCAA GCAGTTCGGC
TTCGACCTGC AACTGGTGCA GCTCGGCGAA GCAGGGCTCG ACCTCGATCA GCGGCGGCGT
ATCGACGAGG GCGATACGGT GATGGCGCTG GGCAAGGGCG GCGATTCCAT CCACGTGTTC
TCCGGCATCG TCGATACCCC CTGGGTGCTG GAAATCGGTC CGCTGTATCA GATGAACCCC
TATCCGCCGC AACTGCTGGT GGTGATCGGC GCCCTGGGGC TGAGCCTGAT CGGCCTGATC
GTCTACCTGC TGGTGCGCTC GCTGGAGCAG CGCCTGCGGG GGCTGGAAGG CGCGGCTACG
CATATCGCCA GCGGCCGCCT GGACGCGCGC GTGCCGACGC GTGGCGCCGA CTCGGTCGGG
CGCCTGGCCA GCAGCTTCAA TGCCATGGCC GAGCACCTGC AGACCTCCCT GAGCACCCAG
CGCGAGCTGG TGCGCGCGGT GTCCCATGAG CTGCGTACGC CGGTGGCGCG CCTGCGCTTC
GGCCTGGAGA TGATCGCCGA TGCACCGGAC GAGGCGGCGC GGCGCAAGTA CATGGAGGGC
ATGGACAGCG ATATCCAGGA CCTCGACAAA CTGGTCGATG AGATGCTGAC CTACGCGCGT
CTGGAGCAGG GGTCGCCGGC GCTGAATTTC CAGCAGGTGG AGCTGCGAGC GCTGATCGAT
CAGGTGATCG AGGAGCTGGC GCCGCTGAGC AACAAGGTGC GCGTGGAGTG TGGCGCGGTG
CTCAGCGTAC AGGCCGACGG CGCCTGCTGG GTCGAGGCCG AGCCGCGCTA CTTGCACCGG
GCGCTGCAGA ATCTGGTGAG CAACGCCATG CGCTACGCCG AAGGGCGGGT GCTGATCAGC
TGTCAGGTGG GTTACAAGCG TTGCCGCATC GACGTCGAAG ACGACGGGCC GGGCGTGCCG
GAAGAGGCCT GGGAGCGGTT GTTCAGCCCC TTCCTGCGTC TCGACGACAG CCGCACGCGG
GCGTCCGGCG GGCACGGGCT GGGCCTGTCC ATCGTGCGCA GGATCATCTA CTGGCACGGC
GGCCGCGCGC AGATCGGTCG CAGCGAAAGT CTCGGCGGCG CGCGTTTCAG CCTGGTATGG
CCGCGGCGGC AGGGGGAGTA G
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| Protein sequence | MTRPWAIDRP AMNSIFLRIY GGMLAALVLV ALLGVGTLHL VNEVRGDQYR EGLARGTFRL
MADNLVPMNE VERRRALAVW SRLLGIPLQL QAMSDVPLEA GERNRLQRGQ VLVRQTGPHS
AKVYGLLDGK PGLLLTGEIQ QISEQLARAT NYLLIDELIR YPVNEQPQRL AELKTAKQFG
FDLQLVQLGE AGLDLDQRRR IDEGDTVMAL GKGGDSIHVF SGIVDTPWVL EIGPLYQMNP
YPPQLLVVIG ALGLSLIGLI VYLLVRSLEQ RLRGLEGAAT HIASGRLDAR VPTRGADSVG
RLASSFNAMA EHLQTSLSTQ RELVRAVSHE LRTPVARLRF GLEMIADAPD EAARRKYMEG
MDSDIQDLDK LVDEMLTYAR LEQGSPALNF QQVELRALID QVIEELAPLS NKVRVECGAV
LSVQADGACW VEAEPRYLHR ALQNLVSNAM RYAEGRVLIS CQVGYKRCRI DVEDDGPGVP
EEAWERLFSP FLRLDDSRTR ASGGHGLGLS IVRRIIYWHG GRAQIGRSES LGGARFSLVW
PRRQGE
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