Gene Pmen_3148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3148 
Symbol 
ID5106477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3485148 
End bp3485852 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content71% 
IMG OID640504404 
Product4'-phosphopantetheinyl transferase 
Protein accessionYP_001188633 
Protein GI146308168 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2977] Phosphopantetheinyl transferase component of siderophore synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.541157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0468971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCT ACCATCCCGC CTGCTGCAGC CCCCTCGACG ATCACGACCC GCTACCGCGC 
CCACTCGCCG GCACGCAGCT GATCAGCACG CGCTTCGACC CCGCCCTGGT CACCGAAGAC
GACTTCGCCC GATGCGGCAT CGCCCCGGTG CGCGGCGTGG CCAAGCGTCA GGCCGAATAC
CTGGCCGGGC GCCTGTGCGC ACGCGAAGCG CTGCGCCGCG TGACCGGCGA GCCCTGCGTG
CCGGCAGTCG GTGAAGACCG CGCGCCGCAG TGGCCGCCAG GCGTGGTCGG CTCCATCACC
CATGGCGACA ACTGGGCCGC GGCGCTGGTC GCGCCCGACA CCCAATGGCG CGCTCTGGGC
ATGGACGTGG AGCGCCTGCT GCCCGCCGAC CGCGCCCTGC GTCTGCAGGG CGAGATCCTC
ACCCCCGCCG AAGTGCAGCG GCTGCAGGCG CTGGACGACG AGGCCCGCGC CGCGCGCATC
AGCCTCACCT TCTCGCTCAA GGAAAGCCTG TTCAAGGCGC TCTATCCGCT GACCCTGACG
CGCTTCTATT TCCACGACGC CGAGCTACTG GAGTTCGATC AGGACAGCGC GCGCCTGCGC
CTGCTGATCG ATCTGCATGC GGACTGGCGC GCAGGCGCCG AGCTGGACGG CCAGTTCGTG
CTGTTCGAGG GCAAGGTGCT GAGTCTGGTG GCGGTGGCGG CGTGA
 
Protein sequence
MNAYHPACCS PLDDHDPLPR PLAGTQLIST RFDPALVTED DFARCGIAPV RGVAKRQAEY 
LAGRLCAREA LRRVTGEPCV PAVGEDRAPQ WPPGVVGSIT HGDNWAAALV APDTQWRALG
MDVERLLPAD RALRLQGEIL TPAEVQRLQA LDDEARAARI SLTFSLKESL FKALYPLTLT
RFYFHDAELL EFDQDSARLR LLIDLHADWR AGAELDGQFV LFEGKVLSLV AVAA