Gene Pmen_3146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3146 
Symbol 
ID5106475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3482200 
End bp3482514 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content66% 
IMG OID640504402 
Productsmall multidrug resistance protein 
Protein accessionYP_001188631 
Protein GI146308166 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.169458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0263424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTGGA TCATTCTGCT GCTCGCCGGC CTGTTCGAGG TCGGCTGGGC CATCGGCCTG 
AAATACACCG ACGGCTTTAC CCGCCCGCTG CCCACCCTGC TTACCGTCTG CGCCATGCTG
GTCAGCCTGG CCCTGCTCGG CCTGGCCATG AAGGAACTGC CGCTGGGCAC CGCCTACGCC
ATCTGGACAG GCGTCGGCGC GGTGGGCACG GTGATCGCCG GCGTCATCCT GTTCGGCGAA
TCCATGGCGC TGCTGCGCCT GGCCAGCGTG GCGCTGATCG TCTGTGGATT GATCGGGCTC
AAGTTGAGCC ATTGA
 
Protein sequence
MPWIILLLAG LFEVGWAIGL KYTDGFTRPL PTLLTVCAML VSLALLGLAM KELPLGTAYA 
IWTGVGAVGT VIAGVILFGE SMALLRLASV ALIVCGLIGL KLSH