| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3131 |
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| Symbol | malF |
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| ID | 5107453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3462248 |
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| End bp | 3463810 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504387 |
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| Product | maltose transporter membrane protein |
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| Protein accession | YP_001188616 |
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| Protein GI | 146308151 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0994344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00445018 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCCGTCG TGAATCTTCC CGCCGCCGTG GCCAGTTCGC CCATGAAACT GTTTTCCCTG
CCGTCGCTAC GTGCCGGCCT GCGCTGGAGC CTGTGGGGCC TGTTCAACGC CCTGGCGCTG
TACCTGGTGC TGGCGCTCTA TGCCCAGCAG CAGCTGGCCT TCGCCCTGCT CGGCCTGGTG
GTCACCGGCA TCGCCAGTTA CGTGTTCATC AGCCGCCGTG CCTACGCCCA TCGCTACATC
TATCCGGCGT TGGCGGGCAT GCTGGTGTTC GTCATCTTTC CGCTGCTGTA CACGGTGGGC
ATCGGCTTCA CCAACTACAG CGGCAGCAAC CTGCTGAGCT TCGAACAGGT GCAGCGCTAC
CACCTGCGCC AGACCTACCT GGCCGGCGAA CGCTACGGCT TCAGCCTGCA TCGCGGCGAG
GATGAAGAGC TGCGCCTGCG TGTCGACAAG GGCGAGCGCG GCGTGTTCGT CTCGCCGCCG
CTGACTGGCG ATGCGGCCGG CGAGCCGCTG GCGCTGAGGG CCGAACACGA ACCCGGCGAG
CTGGGCGAGG CACTGGCGCT GCGCGAGGTG ATCCAGCGCC GCGCCGAGCT GGAGCAGTGG
GTGCTGCGCA GCACCGACGG CGAGCTGCTG CGCCTCTTCG GTCTGCGCGA GGTGGCGGCG
GTCAAGCCGT TGTACCGCCT GCTCGAGGGG GGCGATCTGC TCAACACCCG CAGCAACGAG
CGCCTGGTGG CCGACCATGG CATCGGCTTC TACGTCGACA GCCACGGCAA CAAGGTGGCG
CCGGGCTTCA CCGTGTTCGC CGGCACCAGC AACTTCACCC GGGTACTGAC CGACCCGAGC
ATTCGCGGCC CGTTCCTGGA GATCTTCGTC TGGACCGTGG CCTTCGCCGG CCTCACCGTG
CTTTTCACCC TGGCCGTGGG CCTGGTGCTG GCCAGCCTGC TGCAGTGGGA TCTGGTGCGC
GGCAAGGCGT TCTACCGGCT GATGCTGATC CTGCCTTACG CGGTGCCGGC GTTCATTTCC
ATCCTGGTAT TTCGCGGCCT GTTCAACCAG AACTTCGGTG AGATCAACCT GTTGCTCAAC
GGCCTGTTCG GCATGCGCCC GGACTGGTTC AGCGACCCGA CCCTGGCCCG CTCGATGATC
CTCATCGTCA ACACCTGGCT GGGTTACCCC TACATGCTGC TGCTGTGCAT GGGTCTGCTG
CAGGCCATTC CGCGCGACCT CTACGAGGCC TCGGCGATGG ATGGCGCCAC GCCCCTGGAC
AACCTGCTGA AGATCACCCT GCCGCTGTTG ATCAAGCCGC TGGCGCCGCT TTTGATCGCC
AGCTTCGCCT TCAACTTCAA CAACTTCGTG CTGATCACCC TGCTGACCCG CGGCGGCCCG
GACATCATCG GCGCCACCAC CCCGGCCGGC ACCACCGATC TGCTGGTGAG CTACACCTAC
CGCATCGCCT TCCAGGACTC GGGGCAGAAC TTCGCCCTGG CGGCGGCCAT CGCCACGCTG
ATCTTCCTGG TGGTGGGCGC ACTGGCCTGG CTCAACCTGA AACTGTCGAA AGTCAAAGTC
TGA
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| Protein sequence | MSVVNLPAAV ASSPMKLFSL PSLRAGLRWS LWGLFNALAL YLVLALYAQQ QLAFALLGLV
VTGIASYVFI SRRAYAHRYI YPALAGMLVF VIFPLLYTVG IGFTNYSGSN LLSFEQVQRY
HLRQTYLAGE RYGFSLHRGE DEELRLRVDK GERGVFVSPP LTGDAAGEPL ALRAEHEPGE
LGEALALREV IQRRAELEQW VLRSTDGELL RLFGLREVAA VKPLYRLLEG GDLLNTRSNE
RLVADHGIGF YVDSHGNKVA PGFTVFAGTS NFTRVLTDPS IRGPFLEIFV WTVAFAGLTV
LFTLAVGLVL ASLLQWDLVR GKAFYRLMLI LPYAVPAFIS ILVFRGLFNQ NFGEINLLLN
GLFGMRPDWF SDPTLARSMI LIVNTWLGYP YMLLLCMGLL QAIPRDLYEA SAMDGATPLD
NLLKITLPLL IKPLAPLLIA SFAFNFNNFV LITLLTRGGP DIIGATTPAG TTDLLVSYTY
RIAFQDSGQN FALAAAIATL IFLVVGALAW LNLKLSKVKV
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