Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3123 |
Symbol | |
ID | 5107445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3451409 |
End bp | 3451834 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640504379 |
Product | DGPFAETKE family protein |
Protein accession | YP_001188608 |
Protein GI | 146308143 |
COG category | [S] Function unknown |
COG ID | [COG3795] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.265819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0263064 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTCA TGGTGATGGT CAAGGCGACT GCAGATTCCG AAGCCGGTGT GATGCCCAGC GAGGAGCTGC TGGCGGCCAT GGGCCGCTAC AACGAGGAAC TGGCGGAGGC CGGGGTGATG CTCGCCGGCG AGGGCCTGCA GCCCAGCAGC AAGGGTGCAC GGGTACGGTT CTCAGGCAGC CAGCGCACGG TGATCGACGG TCCGTTCATG GAAACCAAGG AGCTGGTCGC CGGTTTCTGG ATCTTTCAGG TGGCCTCGCT CGAGGAATGC ATCGAGTGGG TCAAGCGCTG CCCCAACCCC ATGCCCGGCG ACTCGGATAT CGAGATTCGC CAGATCTTCG AAGCCGAGGA TTTCGGCGCC GAGTTCACCC CCGAGTTGCG CGAGCAGGAA GAACGCATTC GCGCGCGCAT CAGCATTGAG AACTAA
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Protein sequence | MRFMVMVKAT ADSEAGVMPS EELLAAMGRY NEELAEAGVM LAGEGLQPSS KGARVRFSGS QRTVIDGPFM ETKELVAGFW IFQVASLEEC IEWVKRCPNP MPGDSDIEIR QIFEAEDFGA EFTPELREQE ERIRARISIE N
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