Gene Pmen_3123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3123 
Symbol 
ID5107445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3451409 
End bp3451834 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content63% 
IMG OID640504379 
ProductDGPFAETKE family protein 
Protein accessionYP_001188608 
Protein GI146308143 
COG category[S] Function unknown 
COG ID[COG3795] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.265819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0263064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTCA TGGTGATGGT CAAGGCGACT GCAGATTCCG AAGCCGGTGT GATGCCCAGC 
GAGGAGCTGC TGGCGGCCAT GGGCCGCTAC AACGAGGAAC TGGCGGAGGC CGGGGTGATG
CTCGCCGGCG AGGGCCTGCA GCCCAGCAGC AAGGGTGCAC GGGTACGGTT CTCAGGCAGC
CAGCGCACGG TGATCGACGG TCCGTTCATG GAAACCAAGG AGCTGGTCGC CGGTTTCTGG
ATCTTTCAGG TGGCCTCGCT CGAGGAATGC ATCGAGTGGG TCAAGCGCTG CCCCAACCCC
ATGCCCGGCG ACTCGGATAT CGAGATTCGC CAGATCTTCG AAGCCGAGGA TTTCGGCGCC
GAGTTCACCC CCGAGTTGCG CGAGCAGGAA GAACGCATTC GCGCGCGCAT CAGCATTGAG
AACTAA
 
Protein sequence
MRFMVMVKAT ADSEAGVMPS EELLAAMGRY NEELAEAGVM LAGEGLQPSS KGARVRFSGS 
QRTVIDGPFM ETKELVAGFW IFQVASLEEC IEWVKRCPNP MPGDSDIEIR QIFEAEDFGA
EFTPELREQE ERIRARISIE N