Gene Pmen_3122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3122 
Symbol 
ID5107444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3450976 
End bp3451395 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content61% 
IMG OID640504378 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001188607 
Protein GI146308142 
COG category[S] Function unknown 
COG ID[COG2764] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.364708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0270793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTC ATGCCTATCT GATGTTCGAT GGCCAATGCG AGGCCGCCTT CAATTACTAC 
GCCGAAGTGT TCGGCGGCCA GCTGGAGATG ATGCGCTACG CCGACAGCCC CGAGCAGATG
GACGTACCGG CCGAGTACCA GCAGCGCGTC ATGCACGTGT GCCTGACGGT TGGCGACCAG
TTGCTGATGG CCTCCGATAC CCTGCCGCAA TATCCGCATG ACGGCATCAA GGGCTGCTCG
ATCTCCCTGC AGGTGGACAA CGTGCCGGAG GCCGAGCGCC TGTACGAAGC GCTGTCGAAA
GGCGGTTCGG TGCAGATGGA GCTGCAGGCT ACTTTCTGGG CGACGCGCTT TGCCATGCTC
ACCGACCGCT TCGGCGTGCC GTGGATGATC AACTGCACGG TGGACAGCCA GATGGGCTGA
 
Protein sequence
MKIHAYLMFD GQCEAAFNYY AEVFGGQLEM MRYADSPEQM DVPAEYQQRV MHVCLTVGDQ 
LLMASDTLPQ YPHDGIKGCS ISLQVDNVPE AERLYEALSK GGSVQMELQA TFWATRFAML
TDRFGVPWMI NCTVDSQMG