| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3120 |
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| Symbol | |
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| ID | 5107442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3447528 |
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| End bp | 3449786 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640504376 |
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| Product | glucosylglycerol-phosphate synthase |
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| Protein accession | YP_001188605 |
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| Protein GI | 146308140 |
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| COG category | [G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase
[COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01484] HAD-superfamily hydrolase, subfamily IIB
[TIGR01485] sucrose-6F-phosphate phosphohydrolase
[TIGR02398] glucosylglycerol-phosphate synthase
[TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.361992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0244373 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACTTG CCACCGATCT GGACGGAACC TTCCTTGCCG GCGATCCCGA GGATCGCCTG
AGCCTCTATC AGACCATCGC CGCCCACCCC GAGATTCAGC TCGCCTACGT CACCGGGCGC
AGCCTGGAAG CGGTGCTGCC GCTGCTGGCC GACCCGACGC TGCCACAGCC GGACTTCATC
ATCGCCGACG TCGGCGCCAC GCTGGTGCAC GGCGACAGCC TGCAACCGAT CCAGCCGCTG
CAGAGCGTGG TGGACGCCCT CTGGCCCGGC GAAAGCCAGG TGGCCAGCGC CATTGCCGCC
TTCGGCCTGG AGCGTCAGGA CGTGCCGCAG GCGCGGCGCT GCTCGTACTT CTGCACGCCG
GAGCAGGCGG CCAACCCGGC GCTGCGCGAG ATCGCCGACG AGCTGGGCTG CGACCTGCTG
TACTCGGCCG AGCTCTACCT CGACTTCCTT CCCAAGGGCG TGAACAAGGG CAGCAGCCTG
CGCGCCCTGG CCGACTGGCT GGAGCTCGAC CACGACCAGG TGCTGGCCGC CGGTGACACC
CTCAACGACC TGGCGATGCT CAGCGCCAGC TTCCACGGCG TGTGCGTGGG CCAGTCGGAA
AGCGCCTTGC TGGAGGCCAC CGCCAACCAC TCGCGCACCC TGCATGCCAG CCGCCCCGGC
TGTGGCGGCA TTCTCGAGGC CTTCGCCCAC TTCGGCTTCC TCGGCGAGCA CGGCATCGCC
GCCGAACGGC GCCAGGCCGC GCAGCCGGGC AAGGCCGAGC TGGTGATGGT CTACCACCGC
CTGCCCTACG AGGAATACCG CGGCGCAAGC GGCAAGCTGC AGCGCCGGCG CCCCACCTCG
CCCAACGGCA TCATTCCCAC CCTGCTGAGT TTCTTCGGCG ATGGGCGCAA GGGCTCCTGG
GTGGCCTGGG CGGTGCACGA GGACGGCGAC GAGCCGTTCG ACAGCCACAC CACGGTGGAT
GCCGAGCGCT ATCCCAAGCT CACCGCGGCG CGCGTCAAGC TGAGCAAGGA AGAAGTGGAC
ATCTTCTACA AGCGCTTCTC CAAGGAGGCC TTCTGGCCGA CCCTGCACAC CTTCTGGGAA
CGCGCCACCT TCAACGAGGA CGACTGGCAG GTGTACCTCA AGGTCAACCG TGCCTTCGCC
GAGCGCACCG CGCTGGAGGC GGCCGAGGGC GCCATCGTCT GGCTGCACGA CTACAACCTG
TGGATGGTAC CGGCCTACCT GCGCGAGCTG CGCCCGGATC TGCGCATCGC CTTTTTCCAC
CACACCTATT TCCCCTCGGC GGACGTGTTC AACGTGCTGC CCTGGCGCCG GCAGATCGTC
GGTAGCCTGC TGCAGTGCGA CTACGTCGGC TTCCATATCC CGCGCCAGGT GGAGAATTTC
GTCGACGTCG CCCGCGGCGT GTTCCCGCTC AAGACCCTGA GCCGGCAGAA CTGCGCGCCA
CGTTTCATCA CCTATGGCTG CGCCGTGGGC CTGGAGCGCA TGACCACCGA ACTGGATACC
GGCAGCCGCC GGGTCAGGCT CGGCGCCCAT CCGGTCGGCC TGGATATCGA CCGCGTACGC
AGCGCCCTGG AGGCGCCGAA GATTCGCGAG CTGATGGCGC ACCTGCGCGA GGAGATGCAG
GGCGTGAAGC TGATTCTCTC GGTGGAGCGC CTCGACTACA CCAAGGGCAT CCTGGAAAAG
CTCAACGCCT ACGAGCGCCT GCTGGCCGAC AACCCTGAAC TGATCGGCAA GGTCACCCTG
GTCAGCGTCT GCGTGCCGGC GGCCCGCGAG ATGACCATCT ACGACGAGTT GCAGAGCCAG
ATCGAACAGG CCGTGGGACG CATCAACGGG CGCTTTGCCC GCGTCGGCTG GACGCCCCTG
CAGTTCTTCT TCCGCAGCCT GCCGTTCGAG GAAGTCAGCG CCTGGTACGC CATGGCCGAC
GTCATGTGGA TCACCCCGCT GCGCGACGGC CTGAATCTGG TGGCCAAGGA ATTCGTCGCC
GCACAAGGCC TGCTCGGCGG ACGCGGCGTG CTGGTGCTAT CGGAGTTCGC CGGTGCCGCT
GCCGAACTCA AGGGCGCACT GCTGACCAAC CCGCACGATG CGGCCGACCT GGCGCAGACC
TGCTACCTGG CGCTGAACAT GCCCGCGAGC GAGGCCAAGG CGCGCCTGCG CGAGCTGTTC
GACATCGTCT GCTTCAACGA CATCCGCCGC TGGGGCGAGG AGTTCCTTGC CGGGGTCGAA
CCGCAGCAGG AAAACAAGGT GCTGGAATTG GTCGGTTAA
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| Protein sequence | MLLATDLDGT FLAGDPEDRL SLYQTIAAHP EIQLAYVTGR SLEAVLPLLA DPTLPQPDFI
IADVGATLVH GDSLQPIQPL QSVVDALWPG ESQVASAIAA FGLERQDVPQ ARRCSYFCTP
EQAANPALRE IADELGCDLL YSAELYLDFL PKGVNKGSSL RALADWLELD HDQVLAAGDT
LNDLAMLSAS FHGVCVGQSE SALLEATANH SRTLHASRPG CGGILEAFAH FGFLGEHGIA
AERRQAAQPG KAELVMVYHR LPYEEYRGAS GKLQRRRPTS PNGIIPTLLS FFGDGRKGSW
VAWAVHEDGD EPFDSHTTVD AERYPKLTAA RVKLSKEEVD IFYKRFSKEA FWPTLHTFWE
RATFNEDDWQ VYLKVNRAFA ERTALEAAEG AIVWLHDYNL WMVPAYLREL RPDLRIAFFH
HTYFPSADVF NVLPWRRQIV GSLLQCDYVG FHIPRQVENF VDVARGVFPL KTLSRQNCAP
RFITYGCAVG LERMTTELDT GSRRVRLGAH PVGLDIDRVR SALEAPKIRE LMAHLREEMQ
GVKLILSVER LDYTKGILEK LNAYERLLAD NPELIGKVTL VSVCVPAARE MTIYDELQSQ
IEQAVGRING RFARVGWTPL QFFFRSLPFE EVSAWYAMAD VMWITPLRDG LNLVAKEFVA
AQGLLGGRGV LVLSEFAGAA AELKGALLTN PHDAADLAQT CYLALNMPAS EAKARLRELF
DIVCFNDIRR WGEEFLAGVE PQQENKVLEL VG
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