| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3119 |
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| Symbol | |
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| ID | 5107441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3446175 |
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| End bp | 3447437 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640504375 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001188604 |
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| Protein GI | 146308139 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.485846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0384388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGTCCC TGATTGCCCC CATCAGCTCG CTGCTGAGCG GAGTGGCACT TCTCCTGCTC
GGCAATGGGC TGCTCAATAC CCTCCTGACC CTGCGTGGCG TCGCCGAAGG CTACTCCACC
ACGATGCTCG GCCTGATCAT GTCCGGGTAC TTCGTCGGGT TTCTTCTCGG CACCTGGCTG
GCGGCTCCGC TGGTCCGACG CATCGGGCAT ATCCGTGCGT TCGCCTGTTG CGCCGCACTC
GCCGCCATCG CCGCCCTGCT CCACCTGCTG CTGGTCGACC CCTGGGTCTG GCTGGGCCTG
CGTGTGCTCT ACGGCCTGGC CCTGGTGACC CTGTACATGG TGGTCGAAAG CTGGCTCAAC
GCGCAGACGC CCGGCGAGCA ACGCGGCCGG GTGTTCGCCG TGTACATGGC GGTCAACCTC
GGCGCCCTGG CCCTGGCCCA GCAGCTGCTA CACCTGGCCG ACCCGGTGCA GTTCACCCTG
TTCGCCCTCG CCGCCATCCT CATCAGCGCG GCGCTGATGC CCATCACCCT GACCCGCCAG
GTGCAGCCGA GCCTGCCGGA GGCGCCGCGC AGCAACCTGC TGCAGCTGTG GCGCATCGCC
CCGCTGGCCA TCGCCGCTGC CGGCCTGTCG GGCCTGGCGC TCGGCGGCTT CTGGGGCATG
GCCCCGGTGT ATGCCAGCCT GGCCGGCTTC GATGCCTCGG GCGTGGGCCT GATGATGACC
GCCACCATCC TCGGCGGTGC CCTGCTGCAA TGGCCGATCG GCCTCTATTC CGACAGCCGT
GACCGGCGCT GGGTGCTGCT CTGGGTAGTA GCCCTGGCCG CCGGCATGGC CCTGCTGCTC
AGCCTGCTGC CGGCCGGCAA CGCGTTGCTG ATGGCGATCT TCGTCTGGGG CGGGCTGGCC
TTCGCCATCT ACCCCATCGC CGTGGCGCAG CTGATCGACC AGTTGCACAA GGACGAGATT
CTCGCCGGCT CCAGCGGCCT GCTGATGGTC AACGGCATCG GCGCGGTGTG CGGCCCGCTG
CTCGCCGGCC TGCTGATGGA ACACCTGGGC GCGGCGGCGC TGCCACTGTA CTTCGCCGTC
ACCCTCGGCC TGCTGGCGGC CTACTGCCTG TACCGCCTGC GCCATGTCAG CGACCTGGTC
AGCGGCGACG CCGCGCACTT CGTGCCGATG CTGCGCACCA GCCCCACCGT GCTGGAGCTG
ATGCCCGACG CCCCGCCCCC CGAACCTTGC GACACGGAGG AAAGCCCGAC TCACGCATCC
TGA
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| Protein sequence | MWSLIAPISS LLSGVALLLL GNGLLNTLLT LRGVAEGYST TMLGLIMSGY FVGFLLGTWL
AAPLVRRIGH IRAFACCAAL AAIAALLHLL LVDPWVWLGL RVLYGLALVT LYMVVESWLN
AQTPGEQRGR VFAVYMAVNL GALALAQQLL HLADPVQFTL FALAAILISA ALMPITLTRQ
VQPSLPEAPR SNLLQLWRIA PLAIAAAGLS GLALGGFWGM APVYASLAGF DASGVGLMMT
ATILGGALLQ WPIGLYSDSR DRRWVLLWVV ALAAGMALLL SLLPAGNALL MAIFVWGGLA
FAIYPIAVAQ LIDQLHKDEI LAGSSGLLMV NGIGAVCGPL LAGLLMEHLG AAALPLYFAV
TLGLLAAYCL YRLRHVSDLV SGDAAHFVPM LRTSPTVLEL MPDAPPPEPC DTEESPTHAS
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