| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3117 |
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| Symbol | |
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| ID | 5107439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3444314 |
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| End bp | 3445252 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640504373 |
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| Product | ABC transporter related |
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| Protein accession | YP_001188602 |
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| Protein GI | 146308137 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0287879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0491103 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAC TCGACCGGGT CAGCCGCCGG TTTGGCGGCG TCACGGCGGT GGATGAGCTG
TCGCTGCGCA TCGCCAGCGG CGAGTTTTGC GTACTGGTCG GCCCCTCCGG CTGCGGCAAG
TCCACCACCC TGCGCATGAT CAACCGGCTG GTCGCCTGCA GCAGCGGGCA GATCCGTATC
GATGGCCAGG ACATCGCCAC GCTCGACGAG CGCCTTCTGC GGCTGCGCAT CGGTTATGCC
ATCCAGAACA CCGGGCTGTT CCCGCACTGG ACGGTGGCGC GCAACATCGC CCTGGTGCCG
CAGCTGCTCG GCTGGCCACG GTCGCGCATC GAGGCGCGGG TCGGCGAGCT GCTGGCGCTG
TTCGAACTGC CGGCCGCCGA GTTCGCCGAC AAGTACCCGG ACCAGCTCTC CGGCGGCCAG
GCCCAGCGCG TCGGCGTGGC CCGTGCGCTG GCCGGCGATC CGGAAATCCT GCTGATGGAC
GAGCCGTTCG GCGCGCTCGA TCCGATCACC CGCGACAACC TGCAGAACGA GCTGCTGCGC
ATCCAGTCGC AGATCCGCAA GACCATCGTC TTCGTCACCC ACGACATCGA CGAGGCGCTC
AAGCTGGCCG AGCGCATCGT GGTGATGGAG CACGGGCGCA TCGTCCAGCA TGGCAGCCCG
CAGCAACTGC TCGACCGCCC GGCCAACGCG CTGGTCGAAC AACTGCTCGG CCAGAGCGAG
CGCGGCCTCA AGCGCGCCGG CCTGCGCCGG GTGGAGACGC TGATGCGGCC CCCATCCGGC
GAGCCGCCGG CACAGACCAT CGCCGCCACA GCCAGCCTGC GCCAGGCGCT GTCGCACATG
CTCTCGCAGC ACTGCGAACG CCTGGCCGTG CGCGACACCG CGGGGCGCTG GGTCGGCGTC
GTGCATCTGC TCGATGCCGT GCGAGAGGAG GCCGATTGA
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| Protein sequence | MIELDRVSRR FGGVTAVDEL SLRIASGEFC VLVGPSGCGK STTLRMINRL VACSSGQIRI
DGQDIATLDE RLLRLRIGYA IQNTGLFPHW TVARNIALVP QLLGWPRSRI EARVGELLAL
FELPAAEFAD KYPDQLSGGQ AQRVGVARAL AGDPEILLMD EPFGALDPIT RDNLQNELLR
IQSQIRKTIV FVTHDIDEAL KLAERIVVME HGRIVQHGSP QQLLDRPANA LVEQLLGQSE
RGLKRAGLRR VETLMRPPSG EPPAQTIAAT ASLRQALSHM LSQHCERLAV RDTAGRWVGV
VHLLDAVREE AD
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