Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3106 |
Symbol | |
ID | 5107429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3432938 |
End bp | 3433615 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640504363 |
Product | hypothetical protein |
Protein accession | YP_001188592 |
Protein GI | 146308127 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.562528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCC TCACCACGTT CGCCGCTGGC CTGCTGCTCT CGGCCAACGT TTTCGCCCTG TCTCTTGCCG ACCTGAGCCA GAAGGACGCC AGCGGCGGCC TCAAGGATGC GCTGATCCAG GGCGCCCAGG TGGCCGTCAA GCAGCTGGGC ACCCCCGGCG GCTTCAACAA CAACCCGGAC GTGCGCATCG AGCTGCCGGG CAAGCTCGGC AAGGCGGCCA AGACCATGAA GATGATGGGC ATGGGCGCCC AGGTCGAGCA GCTCGAAGCG AGCATGAACA AGGCCGCCGA GGCCGCCGTG CCGCAGGCTC AGGCGCTGCT GGTCGATGCC GTGAAGAAGA TGACCGTGGC CGATGCCAAA TCGATTCTCA GCGGCCCGCA GGACTCGGCC ACGCAGTACC TGAACAAGAG CAGCCGCGAG CAGATCCGCG CCAAGTTCCT GCCCATCGTC AAGCAGGCCA CCGACCAGGT CGGTCTGGCC CAGCAGTACA ACGCCTTCGC CGGCCAGGCC GCCAGCTTCG GCGTGGTCGA TGCCAAGAGC AGCACGGTGG AAAACTACGT GACCGAGCAG GCGCTCGACG GCCTGTTCGA GATCATCGCC CAGCAGGAGG CGAACATTCG CCAGAACCCG GCCGGCGCCG CCACCAGCCT GGCACAGAAG GTGTTTGGCG CGCTCTGA
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Protein sequence | MLRLTTFAAG LLLSANVFAL SLADLSQKDA SGGLKDALIQ GAQVAVKQLG TPGGFNNNPD VRIELPGKLG KAAKTMKMMG MGAQVEQLEA SMNKAAEAAV PQAQALLVDA VKKMTVADAK SILSGPQDSA TQYLNKSSRE QIRAKFLPIV KQATDQVGLA QQYNAFAGQA ASFGVVDAKS STVENYVTEQ ALDGLFEIIA QQEANIRQNP AGAATSLAQK VFGAL
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