Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3103 |
Symbol | |
ID | 5107426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3431173 |
End bp | 3431706 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640504360 |
Product | hypothetical protein |
Protein accession | YP_001188589 |
Protein GI | 146308124 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.259811 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAGTCC TGTTGATCCT GCTCGGCAGC CTGCTGCTGG CCAGTTGCGG CCAGGTACCG GTCGAACGCT ACGCCAACGA GAAGCCGGTG CTGGACCTGC CCACCTACTT CTCCGGCCCG GTGCAGGCCT GGGGCATGTT CCAGGATCGC TCCGGGGAAG TGATCAAGCG CTTCCACGTC GACATCGACA GCCGCCGCGA GGGCGACAAG CTGATCCTCG ACGAGCGTTT CCTGTACAGC GACGGTACGC GCCAGCGGCG GGTCTGGACG CTCACCCCGG ATGGCCCCGG TCGCTGGATC GGCACCGCCG ATGACGTGGT CGGCCAGGCC GTCGGTGAAG TGGCCGGCAA CGCCCTGCGC TGGCGTTACC ACCTCAACCT GCCGGTGGAC GACACCACCT ATGTGGTCTA TTTCGACGAC TGGATGTACC TGATGGACGA CGACACGATG ATCAACCGCT CGGTCATGAG CAAGTTCGGC ATCGAGCTCG GTCAGGTCAC CCTGTTCTTC CGCCGCGGCG CCGCGCAGCC GTGA
|
Protein sequence | MRVLLILLGS LLLASCGQVP VERYANEKPV LDLPTYFSGP VQAWGMFQDR SGEVIKRFHV DIDSRREGDK LILDERFLYS DGTRQRRVWT LTPDGPGRWI GTADDVVGQA VGEVAGNALR WRYHLNLPVD DTTYVVYFDD WMYLMDDDTM INRSVMSKFG IELGQVTLFF RRGAAQP
|
| |