Gene Pmen_3103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3103 
Symbol 
ID5107426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3431173 
End bp3431706 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content65% 
IMG OID640504360 
Producthypothetical protein 
Protein accessionYP_001188589 
Protein GI146308124 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.259811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTCC TGTTGATCCT GCTCGGCAGC CTGCTGCTGG CCAGTTGCGG CCAGGTACCG 
GTCGAACGCT ACGCCAACGA GAAGCCGGTG CTGGACCTGC CCACCTACTT CTCCGGCCCG
GTGCAGGCCT GGGGCATGTT CCAGGATCGC TCCGGGGAAG TGATCAAGCG CTTCCACGTC
GACATCGACA GCCGCCGCGA GGGCGACAAG CTGATCCTCG ACGAGCGTTT CCTGTACAGC
GACGGTACGC GCCAGCGGCG GGTCTGGACG CTCACCCCGG ATGGCCCCGG TCGCTGGATC
GGCACCGCCG ATGACGTGGT CGGCCAGGCC GTCGGTGAAG TGGCCGGCAA CGCCCTGCGC
TGGCGTTACC ACCTCAACCT GCCGGTGGAC GACACCACCT ATGTGGTCTA TTTCGACGAC
TGGATGTACC TGATGGACGA CGACACGATG ATCAACCGCT CGGTCATGAG CAAGTTCGGC
ATCGAGCTCG GTCAGGTCAC CCTGTTCTTC CGCCGCGGCG CCGCGCAGCC GTGA
 
Protein sequence
MRVLLILLGS LLLASCGQVP VERYANEKPV LDLPTYFSGP VQAWGMFQDR SGEVIKRFHV 
DIDSRREGDK LILDERFLYS DGTRQRRVWT LTPDGPGRWI GTADDVVGQA VGEVAGNALR
WRYHLNLPVD DTTYVVYFDD WMYLMDDDTM INRSVMSKFG IELGQVTLFF RRGAAQP