| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3096 |
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| Symbol | |
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| ID | 5107419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3423009 |
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| End bp | 3424181 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640504353 |
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| Product | hypothetical protein |
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| Protein accession | YP_001188582 |
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| Protein GI | 146308117 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.426708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACCCG ATATCGTCAT CGTCGGCGCC GGCCCGGCCG GCCTGTGCCT GGCCCGCGCC
CTGTCCGGGC ACGGCCTGTC CATCGTCGTG CTGGAACGCC AGGCCGAGCA GGCGCTGGCC
GAACCTGCCT TCGACGGTCG CGAGATCGCC CTCACCCACG GCTCGCAGGC GCTGCTCGAA
CGCCTGGGTC TCTGGGCGCG CCTGCCGGCT GATGACATCG CCGTGCTGCG CGATGCCCAG
GTGTTCAACG GCCCCTCGCT GTTCGCCCTG AAGATTCGTG CCGAGCAGGC CGGCGCCGAG
CGCCTGGGTC ATCTGGTGGC CAACCAGGCC ATTCGCCGCG CGGCCTATCA GGCGGTGCGC
GAATGCGCCG ATGTGCAACT GCTCTGTGAA ACCGGCGTGC ACGCCATTCA CCCGCAGGCG
AATGCGCTGC AGCTGGTGCT GCAGGACGGC CAGGTGCTGC AACCGCGCCT GCTGGTCGCG
GCCGACAGCC GCTTCTCGGA AACCCGCCGC CAGCTCGGCA TCGGCGCGCA GCTCAAGGAT
TTCGGCAAGA GCATGCTGGT GTGCCGCATG CAGCATGAGC AGGACCACCA GCAGGTGGCG
TGGGAATGGT TCGGCTATGG CCAGACCCTG GCCCTGCTGC CGCTCAATGG CCGGCAGTCA
TCGGTGGTGT TGACCCTGCC GCCGCGCGAG ATCGAACGCC TGCAGCAACT CGACGACGCC
CGCTTCGCCC GCGAGATGGA ACAGCGTTTC GAGCGGCGCC TGGGCGCGAT GCAACTGGTC
AGCAGTCGCC ACGTCTACCC GCTGGTGGGC GCCTATGCGC GGCGCATGGT CGGTACCCGC
TGCGCGCTGA TCGGCGATGC CGCCGTGGGC ATGCACCCGG TCACCGCCCA TGGTTTCAAC
TTCGGCCTGG GCAGCGTGCA ACGCCTGAGC GAACAGCTGC TGACGGCATG GCGCGAGGGT
CAGGACATCG GCGCGGCCGA GCCGTTGGCG CGCTACGAGC GCCAGCAGCG CCTGGCCACC
TGGCCGCTGT ATCAGGCCAC CAACCTGCTG GTGGAGCTGT ACACCAACGA CCGCCTGCCC
ATGCGCCTGC TGCGCGGCGC CGGGCTGCGC GTGGCGCAGG GCCTGCTGCC GCTCAAGCGA
GGCATCGCCC AGCACCTGAC GGCGCGCGGC TGA
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| Protein sequence | MSPDIVIVGA GPAGLCLARA LSGHGLSIVV LERQAEQALA EPAFDGREIA LTHGSQALLE
RLGLWARLPA DDIAVLRDAQ VFNGPSLFAL KIRAEQAGAE RLGHLVANQA IRRAAYQAVR
ECADVQLLCE TGVHAIHPQA NALQLVLQDG QVLQPRLLVA ADSRFSETRR QLGIGAQLKD
FGKSMLVCRM QHEQDHQQVA WEWFGYGQTL ALLPLNGRQS SVVLTLPPRE IERLQQLDDA
RFAREMEQRF ERRLGAMQLV SSRHVYPLVG AYARRMVGTR CALIGDAAVG MHPVTAHGFN
FGLGSVQRLS EQLLTAWREG QDIGAAEPLA RYERQQRLAT WPLYQATNLL VELYTNDRLP
MRLLRGAGLR VAQGLLPLKR GIAQHLTARG
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