| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3093 |
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| Symbol | |
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| ID | 5107416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3417570 |
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| End bp | 3419255 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640504350 |
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| Product | malate:quinone oxidoreductase |
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| Protein accession | YP_001188579 |
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| Protein GI | 146308114 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0579] Predicted dehydrogenase |
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| TIGRFAM ID | [TIGR01320] malate:quinone-oxidoreductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.397508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGGCC CAAACGGCCG CTACCCGAAA CCTTGCCTGC ACGGCTGTTG CCGTCGTGCG
ACAACACTGG AATGTCCCAT GAAGAAAATC CTGCTGACGC TGCTTTGTTT CAGCGTGATC
GGTTGCTCCA ACCCCCGCGA GCCCGAGAAA ACCGTCGACG TGCTGCTGAT TGGCGCTGGC
GTGATGAGCG CCACCCTCGG CACCTACCTC AACGAGCTGC AGCCGGACTG GAGCATCGAA
ATCTACGAGC GCCTCGACCG CGTCGCCGGC GAGAGCTCCA ATGGCTGGAA CAATGCCGGT
ACCGGCCACT CGGCGTTCTG CGAGCTGAAC TACACCCCGG AAACCGCCGA CGGTGGCATC
GACATCAGCA AGGCCATCGC CATCAACGAG TCGTTCGAGA TCTCCAAGCA GTTCTGGGCC
ACCCAGGTCG AGCGCGAGGT GCTGAGCAAG CCCAGGAGCT TCATCAACAT CACCCCGCAC
ATGAGCTTCG TCTGGGGCGA CGACAACGTC GAGTACCTGC GCAAGCGCCA CGCCGCGCTG
CAGCACAGCA ACCTGTTCCG CGGCATGGAG TTCACCGAGG ATCACGCGCA GATCGCCCAG
TGGGTGCCGC TGATCATGCA GGGCCGCGAC CCGCAGCAGA AGGTCGCCGC CACGCGCATG
GCCATCGGCA CCGACGTCAA CTTCGGCGAG ATCACCCGCC AGCTGATCGA TTCGCTGATC
GGCAAGGACC AGGCGCGTCT GCACCTGGAA CACGAAGTTC GCGACCTCAA GCGCAACGAT
GACGGCACCT GGCGCGTGAC CGTGGCCGAC CTGGCCAAGG GCGGCGAAGA GCGCAGCATC
GATGCGCGCT TCGTCTTCAT CGGCGCCGGT GGTGGCGCGC TCAAGCTGCT GCAGAAGTCC
GGCATCGAAG AGGCCAAGGG TTATGCCGGC TTCCCGGTCG GCGGCCAGTT CCTCATGACC
CGCAACCAGG ACGTGGTTGC CCAGCACCTG GCCAAGGTCT ACGGCAAGGC CTCGGTGGGT
TCGCCGCCCA TGTCCGTGCC GCACCTGGAC ACCCGCGTGA TCGACGGCGA AAACGTGCTG
CTGTTCGGCC CGTTCGCCAC CTTCTCCACC AAGTACCTGA AGAACGGCTC GCTGCTCGAC
ATGTTCAGCA GCATGACCAC CGACAACTTC CTGCCGATGG TCAACGCCGG CATGGACAAC
TGGTCGCTGA GCACCTACCT GATGGGCCAG CTGATGCTCA GCCAGGACGA GCGCATGGCT
TCGCTGCGCG AGTACTTCCC CGAGGCGCAG GACGCCGACT GGGAGCTGAT CAATGCCGGT
CAGCGCGTGC AGATCATCAA GAAGGATGCC GAGAAGGGCG GCGTGCTGCA GTTCGGCACC
GAGGTGGTGA CCTCTGCCGA CGGCAGCATC AGCGCACTGC TGGGTGCCTC GCCGGGTGCC
TCCACCGCCG CGCCGATCAT GCTGCACCTG ATCGAAAAGG CCTTCGCCGA CAAGGTCGCC
ACTCCTGAGT GGCAAGAACG TCTGAAGGGC ATCATTCCGT CCTACGGGCA GAAGCTCAAC
GATGACCTGG AACTGACCAA CCGCATTCGT CAGTGGAGCA GCGAGCGTCT CGAACTGCTG
CACGTCGAAG TGGCGCCGGA CGTGGAAATT GCCGCCGAGC CCGAGCCGAC TGCCGTGACC
CTGTAA
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| Protein sequence | MCGPNGRYPK PCLHGCCRRA TTLECPMKKI LLTLLCFSVI GCSNPREPEK TVDVLLIGAG
VMSATLGTYL NELQPDWSIE IYERLDRVAG ESSNGWNNAG TGHSAFCELN YTPETADGGI
DISKAIAINE SFEISKQFWA TQVEREVLSK PRSFINITPH MSFVWGDDNV EYLRKRHAAL
QHSNLFRGME FTEDHAQIAQ WVPLIMQGRD PQQKVAATRM AIGTDVNFGE ITRQLIDSLI
GKDQARLHLE HEVRDLKRND DGTWRVTVAD LAKGGEERSI DARFVFIGAG GGALKLLQKS
GIEEAKGYAG FPVGGQFLMT RNQDVVAQHL AKVYGKASVG SPPMSVPHLD TRVIDGENVL
LFGPFATFST KYLKNGSLLD MFSSMTTDNF LPMVNAGMDN WSLSTYLMGQ LMLSQDERMA
SLREYFPEAQ DADWELINAG QRVQIIKKDA EKGGVLQFGT EVVTSADGSI SALLGASPGA
STAAPIMLHL IEKAFADKVA TPEWQERLKG IIPSYGQKLN DDLELTNRIR QWSSERLELL
HVEVAPDVEI AAEPEPTAVT L
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