Gene Pmen_3072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3072 
Symbol 
ID5107395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3399083 
End bp3399814 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content64% 
IMG OID640504329 
Producthypothetical protein 
Protein accessionYP_001188558 
Protein GI146308093 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGT TGCCCGTGAT TTTCAAGCGC GAGCTGGCGA GCTACTTCGC CACGCCGCTG 
GCCTATGTGT TCATCGTCAT CTTCCTGGTG CTGTCCGGGG TGTTCACCTT CTACCTGGGC
GGCTTCTTCG AGGGCGGCCA GGCCAATCTG TCCGCCTTCT TCAACTTCCA CCCCTGGCTC
TATCTGTTCC TGGTGCCGGC CATCGCCATG CGCCTGTGGG CGGAGGAGCG CAAGTCCGGC
TCCATCGAGC TGCTGATGAC CCTGCCGATC ACCCGCTTCG AGGCGGTCAC CGGCAAGTTC
CTGGCGGCCT GGGTGTTCGC CGGCATCGCG CTGCTGCTGA CCTTCCCGAT GGTCATCACG
GTCAACTACC TGGGCGAGCC GGACAACGGC GCCATCGTTA CCGGCTACAT CGGCAGCTGG
CTGCTGGCCG GCGCGTATCT GGCCATTGGC TCGTGCATGT CGGCGCTGAG CAAGAATCAG
GTGATCGCTT TCATCCTCGC GGTCAGTGCC TGCTTCCTGT TTATCGTCAG CGGCTTTCCC
ATGGTGCTCG ACGCCTTCGC CTGGGCGCCG CAGTGGCTGG TGGACGCCAT CGCCTCGCTG
AGCTTCCTGG TGCGCTTCGA CGCCATCAGC AAGGGCGTGA TCGATCTGCG CGACCTGCTG
TATTTCCTCT CGCTGATCGC CGCGTGGCTG ACCGCCACCG CCGTGGTCAT CGACCTGAAG
AAAGCCGACT GA
 
Protein sequence
MTQLPVIFKR ELASYFATPL AYVFIVIFLV LSGVFTFYLG GFFEGGQANL SAFFNFHPWL 
YLFLVPAIAM RLWAEERKSG SIELLMTLPI TRFEAVTGKF LAAWVFAGIA LLLTFPMVIT
VNYLGEPDNG AIVTGYIGSW LLAGAYLAIG SCMSALSKNQ VIAFILAVSA CFLFIVSGFP
MVLDAFAWAP QWLVDAIASL SFLVRFDAIS KGVIDLRDLL YFLSLIAAWL TATAVVIDLK
KAD