Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3072 |
Symbol | |
ID | 5107395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3399083 |
End bp | 3399814 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640504329 |
Product | hypothetical protein |
Protein accession | YP_001188558 |
Protein GI | 146308093 |
COG category | [R] General function prediction only |
COG ID | [COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGT TGCCCGTGAT TTTCAAGCGC GAGCTGGCGA GCTACTTCGC CACGCCGCTG GCCTATGTGT TCATCGTCAT CTTCCTGGTG CTGTCCGGGG TGTTCACCTT CTACCTGGGC GGCTTCTTCG AGGGCGGCCA GGCCAATCTG TCCGCCTTCT TCAACTTCCA CCCCTGGCTC TATCTGTTCC TGGTGCCGGC CATCGCCATG CGCCTGTGGG CGGAGGAGCG CAAGTCCGGC TCCATCGAGC TGCTGATGAC CCTGCCGATC ACCCGCTTCG AGGCGGTCAC CGGCAAGTTC CTGGCGGCCT GGGTGTTCGC CGGCATCGCG CTGCTGCTGA CCTTCCCGAT GGTCATCACG GTCAACTACC TGGGCGAGCC GGACAACGGC GCCATCGTTA CCGGCTACAT CGGCAGCTGG CTGCTGGCCG GCGCGTATCT GGCCATTGGC TCGTGCATGT CGGCGCTGAG CAAGAATCAG GTGATCGCTT TCATCCTCGC GGTCAGTGCC TGCTTCCTGT TTATCGTCAG CGGCTTTCCC ATGGTGCTCG ACGCCTTCGC CTGGGCGCCG CAGTGGCTGG TGGACGCCAT CGCCTCGCTG AGCTTCCTGG TGCGCTTCGA CGCCATCAGC AAGGGCGTGA TCGATCTGCG CGACCTGCTG TATTTCCTCT CGCTGATCGC CGCGTGGCTG ACCGCCACCG CCGTGGTCAT CGACCTGAAG AAAGCCGACT GA
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Protein sequence | MTQLPVIFKR ELASYFATPL AYVFIVIFLV LSGVFTFYLG GFFEGGQANL SAFFNFHPWL YLFLVPAIAM RLWAEERKSG SIELLMTLPI TRFEAVTGKF LAAWVFAGIA LLLTFPMVIT VNYLGEPDNG AIVTGYIGSW LLAGAYLAIG SCMSALSKNQ VIAFILAVSA CFLFIVSGFP MVLDAFAWAP QWLVDAIASL SFLVRFDAIS KGVIDLRDLL YFLSLIAAWL TATAVVIDLK KAD
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