| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3055 |
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| Symbol | glnD |
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| ID | 5107535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3381297 |
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| End bp | 3383996 |
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| Gene Length | 2700 bp |
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| Protein Length | 899 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640504312 |
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| Product | PII uridylyl-transferase |
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| Protein accession | YP_001188541 |
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| Protein GI | 146308076 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
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| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.460023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAGA TGGACCCCGA ACTGTTTGAC CGCGGTCAGT TCCAGGCCGA GCTGGCGCTC
AAGTCCAGCC CCATCGCCGC CTTCAAGAAG GCCATCCGCC ATGCCCGCGA GGTGCTCGAT
GCGCGCTTCA AGGGCGGCCG CGACATCCGC CGCCTGGTGG AGGACCGCGC CTGGTTCGTC
GACCAGATCC TGCAGGAAGC CTGGAAACGC TTCGCCTGGA GCGAGGACGC CGATATCGCC
CTGCTCGCCG TCGGCGGTTA TGGCCGCGGC GAACTGCACC CCTACTCGGA TATCGATCTG
CTGATCCTGC TCGACAGCAG CGATCATGAA ATCTTCCGCG AGCCCATCGA AGGCTTTCTC
ACCCTGCTCT GGGACATCGG CCTGGAAGTG GGCCAGAGCG TGCGTTCGGT CGACGAATGC
GCCGAAGAAG CACGCGCCGA CCTGACGGTG ATCACCAACC TGATGGAAAG CCGCACCATC
GCCGGCCCGG AACATCTGCG CCAGCGCATG CAGCAGGTGA CCAGCAGCGA ACAGATGTGG
CCGAGCAAGC ACTTCTATCT GGCCAAGCGC GAGGAGCGCA AGGCGCGCCA CGCCAAGTAC
AACGACACCG AGTACAACCT CGAGCCCAAC GTCAAAGGCT CACCCGGCGG GCTGCGCGAC
ATCCAGACCG TGCTCTGGGT CGCTCGCCGC CAGTTCGGCA CCCTCAACCT GCAGGCCCTG
GTCGGCCAGG GCTTTCTGCT GGAAAGCGAA TACGCCCTGC TCTCCTCCAG CCAGGAGTTC
CTGTGGAAGG TGCGCTACGC CCTGCACATG CTCGCCGGGC GCGCCGAAGA CCGCCTGCTG
TTCGATTACC AGGCCAGGAT CGCCGCGCTG TTCGGCTATC AGGACGGCGA CGGCAAGCGC
AGCATCGAGC ACTTCATGCA GAAGTACTAC CGCGTGGTCA TGGGCATTTC CGAGCTGTCG
GACCTGATCA ACCAGCACTT CGAGGAAGTC ATCCTGCGCG CCGGCGAAAG CGGCCCGGCC
ACACCGCTCA ACAGCCGCTT CCAGGTGCGC GACGGCTATA TCGAGGTGAC CCACCCGAAC
GTCTTCAAGC GCACCCCCTT CGCCATCCTC GAAGTCTTCG TGCTGATGGC GCAGAACCCC
GAGATCAAGG GCGTACGCGC CGACAGCATT CGCCTGCTGC GCGACAGCCG TCACCTGATC
GACGATGACT TCCGCAAGGA CATCCGCAAC ACCAGCCTGT TCATCGAGCT GTTCAAGTGC
AAGGAAGGCA TCCACCGCAA CCTGCGCCGC ATGAACCGCT ACGGCATCCT CGGCCGCTAT
CTGCCGGAGT TCGGCCACAT CGTCGGGCAG ATGCAGCACG ACCTGTTCCA CATCTATACG
GTCGACGCGC ACACCCTCAA CCTGATCAAG CACCTGCGCA AGTTCCGCTG GCCGGAGCTG
GCGGAAAAGT TCCCGCTGGC CAGCAAGCTC ATCGACCGAC TGCCCAAGCC CGAGCTGATC
TACCTTGCCG GGCTCTACCA CGACATCGGC AAGGGCCGCG GCGGCGACCA CTCCGAGCTG
GGCGCGGTGG ACGCCGAAGC CTTCGCCCGC CGGCATCAGC TGCCGGCCTG GGACAGCGCC
CTGATCGTCT GGCTGGTGCA GCACCACCTG GTGATGTCCA CCACCGCGCA GCGCAAGGAC
CTGTCCGACC CGCAGGTGAT CCACGACTTC GCCCAGTTCG TCGGCGACCA GACCCACCTG
GACTACCTCT ACGTGCTGAC CGTGGCCGAC ATCAACGCCA CCAACCCGAG CCTGTGGAAC
TCCTGGCGCG CCAGCCTGCT GCGCCAGCTC TACACCGAGA CCAAGCGTGC CCTGCGCCGC
GGCCTGGAAA ACCCGCTGGA TCGCGAAGAA CAGATTCGCC AGACGCAGAG TGCGGCGCTG
GACATCCTGG TGCGCGGTGG CACCGACCCG GACGACGCCG AACAGCTGTG GAGCCAGCTC
GGCGACGACT ACTTCCTACG CCATACCGCC AACGACGTGG CCTGGCATAC CGAAGCCATT
CTCCAGCACC CGGCCGACAG CGGCCCGCTG GTGCTGATCA AGGAAACCAC CCAGCGCGAG
TTCGAGGGCG GTACGCAGAT CTTCATCTAT GCCCCGGACC AGCACGATTT CTTCGCCGTG
ACCGTGGCCG CGATGAGCCA GCTCAACCTG AACATTCACG ATGCGCGCAT CATCACCTCC
ACCAGCCAGT TCACCCTCGA CACCTACGTG GTGCTGGACG CCGACGGCGG CTCGATCGGC
GACAACCCCG CGCGCATCAA GCAGATTCGC GAAGGCCTGA TCGAAGCGCT GAAGAACCCG
GACGAGTACC CCACCATCAT CCAGCGTCGG GTGCCGCGTC AGCTCAAGCA CTTCGCCTTC
GCCCCGCAGG TGACCATTCA CAACGATGCG CAGCGCCCGG TGACCATTCT CGAGCTGACC
GCACCGGACC GCCCCGGCCT GCTGGCACGC ATCGGGCGGA TCTTCCTCGA ATACGACCTG
TCGCTGCAGA ACGCCAAGAT CGCCACCCTG GGCGAACGGG TCGAAGACGT GTTCTTCGTC
ACCGATGCCA ACAACCAGCC GCTGTCCGAT CCCGAACTCT GCGCCCGCCT GCAGGAAACC
ATCGTCCGCC GCCTGTCCGA GCCCAGCGCT CAGCCGCAGA GCCTGCAGAT CGACATATGA
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| Protein sequence | MPQMDPELFD RGQFQAELAL KSSPIAAFKK AIRHAREVLD ARFKGGRDIR RLVEDRAWFV
DQILQEAWKR FAWSEDADIA LLAVGGYGRG ELHPYSDIDL LILLDSSDHE IFREPIEGFL
TLLWDIGLEV GQSVRSVDEC AEEARADLTV ITNLMESRTI AGPEHLRQRM QQVTSSEQMW
PSKHFYLAKR EERKARHAKY NDTEYNLEPN VKGSPGGLRD IQTVLWVARR QFGTLNLQAL
VGQGFLLESE YALLSSSQEF LWKVRYALHM LAGRAEDRLL FDYQARIAAL FGYQDGDGKR
SIEHFMQKYY RVVMGISELS DLINQHFEEV ILRAGESGPA TPLNSRFQVR DGYIEVTHPN
VFKRTPFAIL EVFVLMAQNP EIKGVRADSI RLLRDSRHLI DDDFRKDIRN TSLFIELFKC
KEGIHRNLRR MNRYGILGRY LPEFGHIVGQ MQHDLFHIYT VDAHTLNLIK HLRKFRWPEL
AEKFPLASKL IDRLPKPELI YLAGLYHDIG KGRGGDHSEL GAVDAEAFAR RHQLPAWDSA
LIVWLVQHHL VMSTTAQRKD LSDPQVIHDF AQFVGDQTHL DYLYVLTVAD INATNPSLWN
SWRASLLRQL YTETKRALRR GLENPLDREE QIRQTQSAAL DILVRGGTDP DDAEQLWSQL
GDDYFLRHTA NDVAWHTEAI LQHPADSGPL VLIKETTQRE FEGGTQIFIY APDQHDFFAV
TVAAMSQLNL NIHDARIITS TSQFTLDTYV VLDADGGSIG DNPARIKQIR EGLIEALKNP
DEYPTIIQRR VPRQLKHFAF APQVTIHNDA QRPVTILELT APDRPGLLAR IGRIFLEYDL
SLQNAKIATL GERVEDVFFV TDANNQPLSD PELCARLQET IVRRLSEPSA QPQSLQIDI
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