| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3049 |
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| Symbol | |
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| ID | 5107529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3376127 |
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| End bp | 3376873 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504306 |
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| Product | undecaprenyl pyrophosphate synthetase |
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| Protein accession | YP_001188535 |
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| Protein GI | 146308070 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.881887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGA ACAAGCAGGG GGCGGTGCCG CGGCATGTCG CCATCATCAT GGATGGCAAC
AACCGCTGGG CGAAGAAGCG CCTGTTGCCG GGCGTAGCGG GGCACAAGGC GGGCGTCGAC
GCGGTTCGCG CGGTGATCGA GGTGTGCGCC GAGTCGGGTG TCGAGGTATT GACCCTGTTC
GCCTTCTCTA GTGAGAACTG GCAGCGCCCG GCCGAGGAGG TCGGTGCGCT GATGGAGCTG
TTCCTCGGCG CGCTGCGCCG CGAGGCGAAG AAGCTGCTGG ATAACGACAT CGGCCTGCGC
ATCATCGGTG ATCGCTCGCG CTTTCATCCG GAGTTGCAGG CCGCCATGCG TGAGGCCGAA
CTGCTGACCG CCGGCAACCG GCGCTTCACC TTGCAGATCG CTGCCAACTA CGGCGGGCAG
TGGGATATCG CCCAGGCCGC CCAGCGTCTG GCGCGCGAGG TGCAGGCCGG GCATCTGCAG
CCCGAGGACA TCACCCCCGG GCTGCTGCAG GGCTGTCTGG CCACCGGCGA TCTGCCGTTG
CCCGATCTGT GCATACGCAC CGGTGGCGAG CACCGCATCA GCAACTTCCT GCTCTGGCAG
TTGGCTTACA GCGAACTGTA CTTCTCCGAC CTCTACTGGC CGGATTTCAA GCACGAGGCC
ATGCGCAAGG CGCTGGCCGA TTTCGCTACC CGCCAGCGTC GCTTCGGCAA GACCAGCGAG
CAGGTGGAAG CCGAGGCGCG TTCCTAA
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| Protein sequence | MDKNKQGAVP RHVAIIMDGN NRWAKKRLLP GVAGHKAGVD AVRAVIEVCA ESGVEVLTLF
AFSSENWQRP AEEVGALMEL FLGALRREAK KLLDNDIGLR IIGDRSRFHP ELQAAMREAE
LLTAGNRRFT LQIAANYGGQ WDIAQAAQRL AREVQAGHLQ PEDITPGLLQ GCLATGDLPL
PDLCIRTGGE HRISNFLLWQ LAYSELYFSD LYWPDFKHEA MRKALADFAT RQRRFGKTSE
QVEAEARS
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