| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3046 |
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| Symbol | |
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| ID | 5107526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3372761 |
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| End bp | 3374113 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640504303 |
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| Product | putative membrane-associated zinc metalloprotease |
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| Protein accession | YP_001188532 |
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| Protein GI | 146308067 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGGC TGTATATGGT GGTCGGCACC CTGATCGCTC TGGGTGTCCT GGTGACCTTT
CACGAATACG GGCATTTCTG GGTGGCCCGG CGTTGCGGGG TCAAGGTCCT GCGCTTTTCC
GTCGGCTTCG GTACGCCTCT GCTGCGCTGG CATGACCGGC AGGGTACCGA ATTCGTGATC
GCGGCCATTC CGCTTGGTGG CTACGTGAAG ATGCTCGACG AGCGTGAGGG CGACGTGCCG
CCCGAGCTGG TCGAGCAGTC CTTCAATCGC AAGAGCGTAC GCCAACGCAT CGCTATTGTC
GCTGCAGGCC CGCTGGCCAA CTTCCTGCTG GCTCTGCTGT TCTTCTGGTT CGTCGCCATG
CTCGGTAGCC AGCAGGTGCG CCCGGTCATC GGCGCGGTGC AGGAAGGCAG TCTGGCAGCG
GCTGCGGGGC TGCAGGCGGG GCAGGAGATC GTTGCGGTCA ATGGCGAGGC AACCAGCGGC
TGGGCTGCGG TCAACCTGCA ACTGGTGCGT CGTCTCGGTG AGAGCGGCAC CCTGAATCTG
CGCGTCCTCG AGCCGGGGTC GACCGTTGAA ACGCCCAAGC AGGTGCAGCT GGACAATTGG
CAGCGTGGCG TCGACGAGCC CGATCCCATC GGGTCGCTGG GCATTCGTCC CTGGCGTCCG
GCTCTGGAGC CGGTGCTGGC CGAGCTGGAC CCCAAGGGGC CGGCCCACGC GGCAGGGCTG
CAGGCGGGGG ACAGATTGCT GGCGCTCGAT GGCGAGCCGC TGGCCGACTG GCAGGATCTG
GTCGATCGCG TGCGGGCACT GCCGGGAGAG GCCGTGACCC TGCGCATCGA GCGTGCCGGG
CAAGTGCAGG ATGTCGAGCT GACACTGGCG GCGCGCGGCG AGGGTGAGGC GCGCAGCGGT
TATCTGGGTG CCGGCGTGCA GGGGTTGGAA TGGCCGCCGG AGATGCTGCG AGAGGTGCGC
TACGGTCCCA TCGAAGGCAT CGCCGAAGGC ATGCGTCAGA CCTGGGCAAT GAGCCTTCTG
ACCCTCGATT CATTGCGGAA AATGCTGTTC GGAGAGCTCT CGGTAAAAAA CTTGAGTGGG
CCGATAACCA TTGCTAAAGT GGCGGGCGCT TCAGCTGAGT CAGGGCTGGG GGATTTCCTG
AAATTCCTTG CATATCTGAG TATTAGCCTG GGGGTTCTGA ATCTGCTGCC CATCCCCGTA
CTGGATGGTG GGCATCTGCT GTTTTATCTG GTCGAGTGGG TGCGTGGTCG CCCCTTGTCT
GAGCGGGTCC AGGGTTGGGG GATGCAGATC GGCATCAGTC TGGTCATCGG GGTCATGTTG
CTGGCTCTGG TCAACGATCT TGGCCGTCTG TAA
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| Protein sequence | MSGLYMVVGT LIALGVLVTF HEYGHFWVAR RCGVKVLRFS VGFGTPLLRW HDRQGTEFVI
AAIPLGGYVK MLDEREGDVP PELVEQSFNR KSVRQRIAIV AAGPLANFLL ALLFFWFVAM
LGSQQVRPVI GAVQEGSLAA AAGLQAGQEI VAVNGEATSG WAAVNLQLVR RLGESGTLNL
RVLEPGSTVE TPKQVQLDNW QRGVDEPDPI GSLGIRPWRP ALEPVLAELD PKGPAHAAGL
QAGDRLLALD GEPLADWQDL VDRVRALPGE AVTLRIERAG QVQDVELTLA ARGEGEARSG
YLGAGVQGLE WPPEMLREVR YGPIEGIAEG MRQTWAMSLL TLDSLRKMLF GELSVKNLSG
PITIAKVAGA SAESGLGDFL KFLAYLSISL GVLNLLPIPV LDGGHLLFYL VEWVRGRPLS
ERVQGWGMQI GISLVIGVML LALVNDLGRL
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