| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3043 |
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| Symbol | lpxD |
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| ID | 5107523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3368707 |
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| End bp | 3369762 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640504300 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_001188529 |
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| Protein GI | 146308064 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGA CATTCACCCT CGGCCAGCTG GCCGAGCGCC TGGGCGCCAC CTTGCGTGGC
GCCGAAGCTA AGGTCATAAC GGGCCTGGCC ACCTTGCAGG AGGCCAGGCC CGAACAGTTG
AGCTTCCTGG CCAACGCCCA GTACCGCAAG TTTCTGGCGC AGACCCAGGC CGGCGCTGTG
CTGCTGAGCG CAGCTGATGC CGAAGGTTAC GCTGGCGATG CCCTGATCGT TGCCAATCCC
TATCTGGCCT ACGCCCAGCT CTCACACCTG TTCGATCGCA AGCCCAAGGC TGCTCCCGGC
ATTCATGCCA CCGCCCAGGT CGCCGACGAC GCGCAGGTCG ATCCGAGCGC CAGTGTGGGG
CCCTACGCGG TCATCGAGAG TGGCGCGCGT ATCGGTGCCG AGGTCAGTAT CGGCGCGCAC
TGTGTGGTTG GTGCCCGTAG CGTGATCGGT GACGGCGGCT GGCTGGCACC GCGCGTGACG
CTGTATCACG ACGTGCAGAT CGGCAAGCGT GTGGTGATCC AGTCCGGTGC GGTGATCGGT
GGCGAGGGCT TCGGTTTCGC CAACGAGAAG GGCGTCTGGC AGAAGATCGC GCAGATCGGT
GGGGTGACCA TCGGTGATGA CGTAGAGATC GGCGCCAATA CCACCATCGA CCGGGGTGCG
CTCTCCGACA CCCTGATCGG CAATGGCGTG AAGCTGGATA ACCAGATCAT GATCGCGCAC
AACGTGCAGG TCGGTGACAA CACCGCCATG GCCGGCTGCT GCGGGATATC CGGCAGCACC
AAGATCGGCA AGAACTGCAT GATCGCCGGT GGCGTCGGCA TGGTTGGTCA CATCGAGGTG
TGCGACAACG TATTCGTCAC CGGCATGACC ATGGTCACGC GCTCGATCAC CGAACCGGGC
GCCTATTCTT CCGGTACCGC CATGCAACCG GCGGGCGAAT GGAAGAAGAG CGCGGCGCGT
ATTCGTCAGT TGGACGAGAT GGCCAAGCGT TTGCGTGAGC TGGAAAAACA GCTGGCCGCC
GTGACCCAGA CGGCGAACGT CTCATCTGAT GCCTGA
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| Protein sequence | MSATFTLGQL AERLGATLRG AEAKVITGLA TLQEARPEQL SFLANAQYRK FLAQTQAGAV
LLSAADAEGY AGDALIVANP YLAYAQLSHL FDRKPKAAPG IHATAQVADD AQVDPSASVG
PYAVIESGAR IGAEVSIGAH CVVGARSVIG DGGWLAPRVT LYHDVQIGKR VVIQSGAVIG
GEGFGFANEK GVWQKIAQIG GVTIGDDVEI GANTTIDRGA LSDTLIGNGV KLDNQIMIAH
NVQVGDNTAM AGCCGISGST KIGKNCMIAG GVGMVGHIEV CDNVFVTGMT MVTRSITEPG
AYSSGTAMQP AGEWKKSAAR IRQLDEMAKR LRELEKQLAA VTQTANVSSD A
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